Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4617 |
Symbol | |
ID | 6285168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 945221 |
End bp | 946267 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642619094 |
Product | 4-hydroxy-2-ketovalerate aldolase |
Protein accession | YP_001893129 |
Protein GI | 187926784 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | [TIGR03217] 4-hydroxy-2-oxovalerate aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTACGC TGCAAGGCAA GAGCATTACC GTGCATGACA TGACGTTGCG TGACGGCATG CACCCCAAGC GCCACCTGAT GACGCTCGAC CAGATGCGCA CGATTGCGCA GGGCCTGGAC GCGGCCGGCG TGCCCCTGAT CGAAGTCACC CACGGCGATG GGCTGGGTGG TTCCTCGCTC AACTATGGAT TTCCCGCGCA CAGCGACGAG GAATACCTGG GCGCCGTCAT TCCGCTGATG AAGCAAGCCA AGGTGTCGGC GCTGCTGCTG CCCGGCATCG GTACCGTCGA TCATCTCAAG ATGGCGCGTG AGCTGGGCGT GCATACGATT CGCGTGGCCA CGCACTGTAC CGAGGCCGAT GTCTCGGAGC AGCACATCAG CTACGCGCGC AAGCTCGACA TGGACACGGT GGGCTTTCTG ATGATGGCGC ACATGAACAG CCCTGAGGGG CTCGTCAAGC AAGCCAAGCT GATGGAGAGC TACGGTGCCA ACTGCATCTA CATCACGGAC TCTGCGGGTT ACATGCTGCC GGACGATGTG AAGGTGCGTC TGTCTGCCGT GCGTGAAGCG CTAAAGCCTG AGACCGAACT GGGTTTCCAC GGCCATCACA ACCTGGCCAT GGGGATCGCC AATTCCATTG CGGCCATCGA GTGTGGTGCC ACGCGCATCG ATGCAGCGGC CGCGGGGCTC GGGGCCGGTG CGGGCAATAC GCCGATGGAG GTGCTGGTGG CGGTGTGCGA CCGCATGGGC ATCCGTACCG GCGTGGATGT GTGGAAGATC CAGGATGTGG CGGAGGATTT GGTGGTGCCC ATCATGGACT TCCCCATCCG CATTGACCGG GACGCACTCA CGCTGGGCTA TGCGGGCGTC TACGGCAGCT TCCTGCTGTT TGCCAAGCGC GCCGAGAAGA AATACGGTGT GCCCGCGCGT GATCTGCTGG TCGAACTCGG CCGGCGCGGC ATGGTGGGTG GTCAGGAAGA CATGATCGAG GACACCGCGC TTACCATGGC CCGCCAGCGC GGCCTGTTGC CTGAACAGGC GGCCTGA
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Protein sequence | MTTLQGKSIT VHDMTLRDGM HPKRHLMTLD QMRTIAQGLD AAGVPLIEVT HGDGLGGSSL NYGFPAHSDE EYLGAVIPLM KQAKVSALLL PGIGTVDHLK MARELGVHTI RVATHCTEAD VSEQHISYAR KLDMDTVGFL MMAHMNSPEG LVKQAKLMES YGANCIYITD SAGYMLPDDV KVRLSAVREA LKPETELGFH GHHNLAMGIA NSIAAIECGA TRIDAAAAGL GAGAGNTPME VLVAVCDRMG IRTGVDVWKI QDVAEDLVVP IMDFPIRIDR DALTLGYAGV YGSFLLFAKR AEKKYGVPAR DLLVELGRRG MVGGQEDMIE DTALTMARQR GLLPEQAA
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