Gene Rpic_4597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4597 
Symbol 
ID6285190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp926216 
End bp926767 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content61% 
IMG OID642619075 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_001893110 
Protein GI187926765 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTAAAA GCGGGGCCGA ACGGGACAAC TTGATTCTGG CTGCACAGAC GGGAGACCCT 
GCTGCAATCT CGCGTCTGCT CGCCGTCTGT CAGGCGGATG CCCGGCGGTA TGCGTATAAG
CATTGCCAGG CCAGCGATGT CGACGATGCC GTGCAGGAGT CTCTGCTCGT CATCTCGCGC
AAGGTGAAGG GTCTTAAGGC CGCTGCTGCT TTCTCTGCCT GGCTGTTCAC GGTCATCAAG
CGCGAATGCC GCAGGCTTGA ACGCATGATG TTCAAGCACG ACCCATTGCC GGACGAGGCC
GCAGAGGAAC TGCTCGTCCA GCGTAGCGAC GAGGCGCTGC GAGTGGACCT GGCCAACGCC
TTGGAATCCT TGCCCGCGCA CTATCTGGAA GTTGTGCTGC TGCGCGATTT CGAAGAGCTA
ACGATCGCCG AGATCGCTGA GCGTCTTGGC GAACCGCAGG GCGCTGTCAA AAGTCGGCTG
CATCGCGCGC GGGAGCTGGT GCGCGAATAC ATGCTGGGCT CCGACGTCGC GTCGTATCAG
TCGCCAAGGT GA
 
Protein sequence
MVKSGAERDN LILAAQTGDP AAISRLLAVC QADARRYAYK HCQASDVDDA VQESLLVISR 
KVKGLKAAAA FSAWLFTVIK RECRRLERMM FKHDPLPDEA AEELLVQRSD EALRVDLANA
LESLPAHYLE VVLLRDFEEL TIAEIAERLG EPQGAVKSRL HRARELVREY MLGSDVASYQ
SPR