Gene Rpic_4587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4587 
Symbol 
ID6285933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp918105 
End bp918830 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content66% 
IMG OID642619066 
Product17 kDa surface antigen 
Protein accessionYP_001893101 
Protein GI187926756 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3133] Outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAACG AGCAACCGAA CGTCCAAGGT CAACACTACG CCGGCTCGTC GACGGGCCAT 
ATGCCACAGT CGCGCCGTAT GCATCCGCTG ATGGCCGCCG CTGCCGTCGC TGTGATCATC
GCGAGCGTCA CGGGGGTGGC TGCAATGACT GGCGTGCTGC CCACCTCGAA GGCTATGCAG
GGCAGCACCG GCCCGAACGT CGCCGCGCAA CCGGCCTCCA CACCGCTGGC ACTTGCGGCT
CCCGGCCAGA CGGCAATGCC GAACCAAGCG GCCGCTGCCT ATCCGACACA GCCGAGCGCG
GTACACCATG CGGTGCATCG TCCGGCCCCG TCGTATGCGG AACATAACCC GTCGGCGAAT
GCCGACTATG CGCAGCCGCG CCCGGCCGCG AACCCATATG CCGGTCAGGT GACTGCCGTC
ACGCCGATCG CCACGCAGCA AGGCAACGAA ACCGGTCTGG GCATGATCGG CGGCGCAGTG
GTGGGTGGCC TTCTGGGCAA TCAAGTCGGC AAGGGCAATG GCCGCACGTT GGCGACCGTC
GCCGGCGCGG TGGGTGGCGG CTACGCAGGC CATGAAGCTG AAAACTACTA CCACCGCGAC
ACGTCTTACA ACGTCAGCGT ACGCATGGAC AACGGCGCGA TCCGCACCTT CACGTATAAG
GCCGCACCGG GCTTTCAAGT GGGTGACCGT GTGCACTTGG AAAACGGCAG CCTGGCTGCA
GGCTGA
 
Protein sequence
MNNEQPNVQG QHYAGSSTGH MPQSRRMHPL MAAAAVAVII ASVTGVAAMT GVLPTSKAMQ 
GSTGPNVAAQ PASTPLALAA PGQTAMPNQA AAAYPTQPSA VHHAVHRPAP SYAEHNPSAN
ADYAQPRPAA NPYAGQVTAV TPIATQQGNE TGLGMIGGAV VGGLLGNQVG KGNGRTLATV
AGAVGGGYAG HEAENYYHRD TSYNVSVRMD NGAIRTFTYK AAPGFQVGDR VHLENGSLAA
G