Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4577 |
Symbol | |
ID | 6285134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 908351 |
End bp | 911053 |
Gene Length | 2703 bp |
Protein Length | 900 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642619057 |
Product | Integrase catalytic region |
Protein accession | YP_001893092 |
Protein GI | 187926747 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAGATA AGGCCCAACT TACCGAGCTT TTCGACCGGT TTAGTACTCC GCCGGCCGGT CGTAAGCTCA TCTTGGATGC GCGCGTCCAA GCTCCTGTCC GTGACGTCAA GTCACGAGGG GGGAATGTCA TCACCTTGTT AGCTAGTCGG AAGATGGGCG GCGACGTCGA AATTGCGACC GAAAGCCGGC ACATCGAGTT CGCAGCGGCT GTTGGTCTGG AATACGACAA CAACGTACTC GAGTTCTACA CGCAGCCGTG TCAGCTCAAG CTCGAACTGA TCGACGAGGC GACAGGGAAA ACACACTCTT CCACGCATGT GCCGGACTTT CTGTCCATCC GGAACGACGG GTTCATGCTG GAGGAATGGA AGTCAGACGT CAAACTCGAA CGGCTCGCAG AACGCTTTCC ATATCGCTAC GTTAGGTCGA GTGATGGGCT GTGGCGGTCC CCTCAAATTG AGAGCCAGCT TGCCGAACTG GGAATCCGAT ACCGAATCTT CAGCGACTCG GCGATGCCGC GCCGACGGGT TGAAAACCTG CTTTATCTCG CCCATTACTT CGGCCCCGCA GCGGAGCCCT GCCCCGAAGA GGCGTTAGCG CAGTTGCAAT TGGCTCTGCG TGAGCACGGA CACCTCACGT TCTCTGAGCT TCTTGCACCA CCGTATGACT TCAGTGCTGA TTTGCTGAAC AAGGCAATTG CAGACAACTT GGTTGCTACG GACCTCGATA GCGAGACGCT CACAGAAAAG CGCCTATTCA ATTTGTATCG CGACGATGTG CTGCGTGACT TCATGGTGGC AAATGTCAAA TCGAGTGGCA CTTCTCCGCT GACGCCGTTC GCTCTCGACA TCGCAGATGG CACCAAGTTC TTGTTCGAAG GGCAAGAGCT GACCATCGTC GTGGTTGGCG AAGGTAGCGT GGTCTGCAAT AGGCCGGATG GCTCTTCAAT AACTCTCACT CGCGAGTGGC TGCTTAGCGC GCATGAGAGG AACCACATCA CTGGAATTGA AAGCGCACGG ACACAGAACC GGGGGCTGGG TAGCTATTCG AAAGAGCAGC TTACGACAGC GCTGCAACGG CAGGCGCTGC TTGAATCGCC AGCACGCTCT TCCGGTGTCT CAGAGCGCTC TCTGCGGCGC TGGTCTGCGC GGCAGAATGT TGCCAACGCG AACGGCGCCG ACAAAGTATT GGCCTTGGTG CCCCATTGCA AACAGCGTGG AAACCGGAAG CGTCGTCTCA GCGACCTGCA GCTGGCAGTC ATGGAACGAG TCATCGACGA ACACTGGCGA ACCAGCGAAG CAATCAACTA CAAGACATGC TACCGCTTTC TCGTTGTGGC ATCTGAGAAA GAAGGGGTGA AATCGCCCTC ATACCCAACG CTGATACAGC ACATCCAAGC TCTTGAGACC AACCGCGATG TTCGTGTGCG ACATGGGAAG CGCTTGGCCT ACCTGCAGGA CACGTTTGTC GACGTTCTGT ACTACGACAC ACCTGTGCAC GGAAGCCGTC CATTTCAATA CGTGCACATT GATCACACAC AGCTCGACAT CGAGGTCGTC TCAAGTCGCA CGGGAGATGC ACTCGGGCGC CCCTGGCTGA CAGTTGCCAT CGACGCTTGG TCTCGCCGCA TTCTGGCCTT TTACCTGACC TTCGACCCGC CGTCCTATAT CTCGGTAATG ATGGCTATCC GCGACATGGT CCGCCGATTC AGTCGATTGC CCGAGTTCAT CGTTGTGGAT AACGGAACGG ACTTTCTGTC AGACGCTTTC AAGACGTTCC TCCGCGCTAT GGGTACCCAT TTGCGATTCA GGCCCGCAGG CCGTCCGCGC CACGGTGCCG TTCTGGAGCG CTTGTTTGGG CGGCTGAATA CTGAGTACAT CCACAACTTA GCTGGCAATA CCAAGGCAAC AAAGAATGTG CGAGCAGTGT CTGGCTCGCA TCTCCCCAAG AAACTGGCGC AGTGGACGCT GGAAGCCCTG TATCGCGGCG TTGAATATTG GGCCACCGAG TACTACGACA ACGAGCCTCA CCAGGCGCTG AATGAATCCC CTCGAGATGC GTTCCAGCGC GGCCTGCGCG AGAGTGGATT GCGGCCGCAG CGGCAGGTGG TCTTCAACAG AGACTTTCTG ATCGCCACTT GCCCGCCGGT TGATCGCAAA GGCACGCGCA TGGTCAATCA GCAGCGCGGC GTCAAGGTCG ACGATCGCTT CTATTGGAGC GGCGTATTTA CGTCGCCCAA AGTCGCTGGC GCCAACATAC CTGTGCGCTA TGACCCCTGG GATGCCTCGT CTGTCTACGT ACTGGTGAGA GACCACTGGC ACCACGCCGC CTGCCGAAAT TTGTATGACC TCGGTCAATT GACCGAGGCG GAACAAAAGG CCTTCTCCGA AGAGTTTCGG TCCCGTACGG GGACACGCCC GACCGACAAA GGCGCCGCTC AACGGCTGCG CGAGTTTATG CGCATCTTCA CGCCGGAGGG TGCGATGGCC GTTCAGTTTG AACGCCAAGC CGAAAACAAG GCGCTCTACA ACAGCCTGCA GATGTCGAGC GTTACACCCG TAATCGCTCC ACATCGATTC GATTTTGAGG ACACAGCAAG TTCCACCACT TCGTCACGGC GGGACCAGAA AACAACAACT GCACCGACGC CACCCCAACG CCCGGCAGTC TTGGGCGACT CCACTGAATT TGAAGACTTC TGA
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Protein sequence | MLDKAQLTEL FDRFSTPPAG RKLILDARVQ APVRDVKSRG GNVITLLASR KMGGDVEIAT ESRHIEFAAA VGLEYDNNVL EFYTQPCQLK LELIDEATGK THSSTHVPDF LSIRNDGFML EEWKSDVKLE RLAERFPYRY VRSSDGLWRS PQIESQLAEL GIRYRIFSDS AMPRRRVENL LYLAHYFGPA AEPCPEEALA QLQLALREHG HLTFSELLAP PYDFSADLLN KAIADNLVAT DLDSETLTEK RLFNLYRDDV LRDFMVANVK SSGTSPLTPF ALDIADGTKF LFEGQELTIV VVGEGSVVCN RPDGSSITLT REWLLSAHER NHITGIESAR TQNRGLGSYS KEQLTTALQR QALLESPARS SGVSERSLRR WSARQNVANA NGADKVLALV PHCKQRGNRK RRLSDLQLAV MERVIDEHWR TSEAINYKTC YRFLVVASEK EGVKSPSYPT LIQHIQALET NRDVRVRHGK RLAYLQDTFV DVLYYDTPVH GSRPFQYVHI DHTQLDIEVV SSRTGDALGR PWLTVAIDAW SRRILAFYLT FDPPSYISVM MAIRDMVRRF SRLPEFIVVD NGTDFLSDAF KTFLRAMGTH LRFRPAGRPR HGAVLERLFG RLNTEYIHNL AGNTKATKNV RAVSGSHLPK KLAQWTLEAL YRGVEYWATE YYDNEPHQAL NESPRDAFQR GLRESGLRPQ RQVVFNRDFL IATCPPVDRK GTRMVNQQRG VKVDDRFYWS GVFTSPKVAG ANIPVRYDPW DASSVYVLVR DHWHHAACRN LYDLGQLTEA EQKAFSEEFR SRTGTRPTDK GAAQRLREFM RIFTPEGAMA VQFERQAENK ALYNSLQMSS VTPVIAPHRF DFEDTASSTT SSRRDQKTTT APTPPQRPAV LGDSTEFEDF
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