Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4558 |
Symbol | |
ID | 6285326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 890499 |
End bp | 893081 |
Gene Length | 2583 bp |
Protein Length | 860 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642619039 |
Product | hypothetical protein |
Protein accession | YP_001893075 |
Protein GI | 187926730 |
COG category | [S] Function unknown |
COG ID | [COG3002] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.117812 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.809952 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACGA CAAGCCTTGG CGCAGACGCC GCACACACGC ACGCGATGGT TCCGTCAGCG ATCCCGCCTG AGGGTTCCGA TGCCGCAGGC CCGGATGACA CGTTGATGCA GCAGATGCAA GCCGCGTGCG CACAAGCCTG CCGCGCGATC GCTCCGGCCT GGCCGCTGGA CCGCGCCATC GCCGTCAACC CGCATTGGGG CCGCGTGGAC ATGCCGGTTC GACGGGTGGC CGCGCGGATG GCCGTGCTGG GAGGCATCCA GGTCTTTCCG ACGCGCCGCA GCCAGCAGCA GGCATGGGTT GCGGGCCGGA TCACACCGGC AGACCTTGCC GATGCGCTCG CGCAATTGCC GGCCGCGAGG GCAGCCGGGC TCACGGAGGC CAAGTGCGTG GAAGCGCTGC GCCGCCACGA GCTGCCACCG CGCCTGCCAT TGTTGATCGA CGTGCTGGAC AACGATCCAC AACGTCACAC CCGCCTCTCG TGGCGCCAGG CAATCACGCA CCAGGTCAGC CAGACCTGTG CCGCCTATTT CGATGTGCAC CAGGCCGACT GGCAGCCTGA GCGCGCAGAC GGCCTGTACG GCTTCTGGCG CGACACCTTG CAGCACGACC ATGGCATTGG CCTGCTGATG GGCCTTCCCG ACCTGGGTCG TCGGCTGGAT GCGCTGCCGG CAACGCCCCT CGATGCCGAG CACTGGGCGC TCAATCAATT GGGCTTGCCG CAACCTGTGT GGGCCGATTA TCTGGAGGCG GTGCTGCTGA CGGTGAACGG ATGGGCCTCG TGGTGCGCCT ATCTCGGCTG GCAGGCTGCC CAGGAAGGAC GGGAAGATCC GCATCTGCGC GATCTGCTCG CGATTCGCCT TGCGTGGGGC GCCATCGTGC AGGAGTGCCG GGACGATGCA AGCACGCGCA TGGCGTTCGC CGCGCTGCAA GCGGAGTGGC AGCAGGCACC CTCGGCATTG GCAGAGGCCG AAGCGGCACT GCTGGTCGAT GAAGTCTGGC AGTTGGCCCT CGAAGCCGGC TACCAGCGCC AACTGGCGCA CCGGCTCGCG GGGGCGGGTG CGCTGCCACC GGTACCGCAA GACATCGAGG TGCAGGCCGC GTTCTGCATC GACGTACGCA GCGAACCCCT GCGGCGTGCG CTGGAATGCG TCTGGCCCGC CGTGCAGACC ATCGGCTTCG CGGGCTTTTT TGGCCTGCCC GTTGCGTACA CACCGCTCGG GACGGCTGCG CGGCGGCCAC AGCTTCCGGG CCTTCTGGCG CCAACCATGG AAGTCTCTGA TCGTATCGAC GCTGCCCAGG GGCCGGACGG CATGCCGGAT CCCGCCGCCG AGCGCGCCGC AGAACGGGCA AGGCGTCACC GCCTGGGCGC ATCGGCTCAG GTGGACGGGG CCAGCCGCTG GCCAAGCGCG GCATTCTCTT ATGTCGAAGT GGCGGGGGTC GGCTATCTCG GCAAGCTCTG GCGCTGGTTG CGCCCCTCCA CCGAAGCGCG GTCGCGCGCA GACCTCACCG GCCTGCCCTC GCGATATCGG GCCGTCTGCC GGCCCCACCT GCATGCGGAG AGCGTAGAGA CCAAAGCGGC CCTTGCCGCC CGCGTGCTCC GCGCCATGGG GCTGGCAGAA CACCTGGCAC CGCTGGTGCT CTTCGTGGGA CACGGCAGTC AAACGAGCAA CAACGCGCAT GCAGCGGCAC TGGACTGTGG GGCATGCTGC GGCCAAACCG GTGAGGTGAA TGCCCGCAGC CTGGCGCTGC TGCTGAATGA GCCGCCGGTG CGCGCCGCGT TGCAGGCGCA CGGCATCACG GTTCCTGAGG ACACCGTGTT CGCGGCTGCC CTGCACAACA CCACCACCGA CGAGATCGAA GGCTTCGATC TCGACCGGCT GCCCCCTGCC GCGCGCGCGC GTTGGGACCA CCTGCAATCG GTCCTGAAGC ATGCTTCCGA CCAGGTACGG CGCGAACGGG CACCGTCGTT GGGCCTGGAC CCGCGTGCCC CTCATGATGA TCTGCTGACC CAACTGCGGC GGCGCGCCAA TGATGGTGCA CAGACGCGGC CAGAGTGGGG GCTGGCAGGT AACGCCGCGT TCGTCATCGC GCCGCGCCAT CGCACACAAG GCGTGGTTCT GGACGGGCGC AGCTTCCTGC ACGATTACGA TGCCAGCCGC GACCACGACG GCAGCGTGCT GGAGTTGCTG ATGACGGCGC CGATGCTCGT GACCCACTGG ATCAACTGGC AGTATCACGC GTCGATGTGT GACCCGGTGC ATCTGGGCAG CGGCAACAAG CTGCTGCACA ACGTGGTGGG CGGCTCCATC GGCGTGTTCG AGGGCAATGG GGGCGATCTG CGTATCGGCC TGTCGCGGCA GTCCCTGCAC GATGGGCAGC GTTGGATTCA CGAGCCGCTG AGGCTGACTG TCCTGATCGA CGCCCCTGAG ACAGCAATCG AGCGCGTTGT CGACAAGCAC CCCATTGTCC GGCAACTGGT CGACAACGGT TGGCTGCATC TCTGGCGCTT CGGCCCGCAG GATCTGCAGC GCTACGCGGC TGGCCAATGG CGCCCGCTGA CATCGCGGCA CGCGACTTGC TAG
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Protein sequence | MTTTSLGADA AHTHAMVPSA IPPEGSDAAG PDDTLMQQMQ AACAQACRAI APAWPLDRAI AVNPHWGRVD MPVRRVAARM AVLGGIQVFP TRRSQQQAWV AGRITPADLA DALAQLPAAR AAGLTEAKCV EALRRHELPP RLPLLIDVLD NDPQRHTRLS WRQAITHQVS QTCAAYFDVH QADWQPERAD GLYGFWRDTL QHDHGIGLLM GLPDLGRRLD ALPATPLDAE HWALNQLGLP QPVWADYLEA VLLTVNGWAS WCAYLGWQAA QEGREDPHLR DLLAIRLAWG AIVQECRDDA STRMAFAALQ AEWQQAPSAL AEAEAALLVD EVWQLALEAG YQRQLAHRLA GAGALPPVPQ DIEVQAAFCI DVRSEPLRRA LECVWPAVQT IGFAGFFGLP VAYTPLGTAA RRPQLPGLLA PTMEVSDRID AAQGPDGMPD PAAERAAERA RRHRLGASAQ VDGASRWPSA AFSYVEVAGV GYLGKLWRWL RPSTEARSRA DLTGLPSRYR AVCRPHLHAE SVETKAALAA RVLRAMGLAE HLAPLVLFVG HGSQTSNNAH AAALDCGACC GQTGEVNARS LALLLNEPPV RAALQAHGIT VPEDTVFAAA LHNTTTDEIE GFDLDRLPPA ARARWDHLQS VLKHASDQVR RERAPSLGLD PRAPHDDLLT QLRRRANDGA QTRPEWGLAG NAAFVIAPRH RTQGVVLDGR SFLHDYDASR DHDGSVLELL MTAPMLVTHW INWQYHASMC DPVHLGSGNK LLHNVVGGSI GVFEGNGGDL RIGLSRQSLH DGQRWIHEPL RLTVLIDAPE TAIERVVDKH PIVRQLVDNG WLHLWRFGPQ DLQRYAAGQW RPLTSRHATC
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