Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4556 |
Symbol | |
ID | 6285288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 887919 |
End bp | 888797 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642619037 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_001893073 |
Protein GI | 187926728 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.230121 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.746697 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACTCG AGCAACTCAA CTTCCATCAC TTGTTCTACT TCTGGCGCGT TGCCAAGGCA GGCCACCTGA CCCGCGTGGC GACCGAACTG CATACCTCGC AGTCCGCGCT CTCTGCGCAA ATCCGTCAGC TGGAGGATCG GCTTGGCGAG CCGTTGTTCG CGAGGGAAGG GCGCCGCCTG GTGCTGACGG ACACCGGACA GCTCGTGCTC TCGTATGCCG AGGACATCTT CGGGCTCGGG CAGGAAATGC TCGGCCGCCT CGTCGGCCGC AGCGAAGGCA TGACGCGGCT TCGGGTCGGC AGTGTCGCGA CGTTGTCGCG GAACTACCAG GAAAACTGGA TCCGTCCTGC GTTGGCCGAC CCGTCCGTTG TGCTCACGCT GGAGTCGGGC GTGCTCGAAG GTCTGCTGGC CAGGCTGCTG CAGCATCAGC TGGACGTCGT GCTTGCCAAC GAGACGGTGC CATCGAATGC AGACCGCCCC TTGCACTGCC GTTTTCTCGG CAGCCAGTCC ATCTCGCTCG TGGGCCCCGC CGGCGTCTGG AAGAACCGCA GCCTGCGCAT CCCCGACGAT CTGCAAGGAC TTGACATCGC CCTGCCGGGG CCACGGCATG CGCTGCGCAG TCAGTTCGAT GCACTGTGCG CGTCGGCTGG CGTCACCCCA CACCTGCGCG CCGAGGTGGA CGACATGGCC ATGCTGCGTC TGATTGCCCG CGACAGCGGC TGGCTGACCG TCCTACCCGA GGTGGTGGTG CAGGACGAAC TGCGTGCGGG CGTATTGGTG ACGGTGGGCC AGTCAACACA ACTGCAGGAG CGCTTCTACG CCATCACGAC CACGCGGCGG CACCGCATCG AGGCCCTGGA GCGCTTGCTG TCCGATTAG
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Protein sequence | MRLEQLNFHH LFYFWRVAKA GHLTRVATEL HTSQSALSAQ IRQLEDRLGE PLFAREGRRL VLTDTGQLVL SYAEDIFGLG QEMLGRLVGR SEGMTRLRVG SVATLSRNYQ ENWIRPALAD PSVVLTLESG VLEGLLARLL QHQLDVVLAN ETVPSNADRP LHCRFLGSQS ISLVGPAGVW KNRSLRIPDD LQGLDIALPG PRHALRSQFD ALCASAGVTP HLRAEVDDMA MLRLIARDSG WLTVLPEVVV QDELRAGVLV TVGQSTQLQE RFYAITTTRR HRIEALERLL SD
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