Gene Rpic_4548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4548 
Symbol 
ID6285814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp878353 
End bp879567 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content69% 
IMG OID642619029 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_001893065 
Protein GI187926720 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2807] Cyanate permease 
TIGRFAM ID[TIGR00896] cyanate transporter 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCTA CACCCTCCTC TCCTGCCAGC CCGCACGCTG AGCGTCGCTC GGCTGGTGCG 
CTGGCGCTTC TCGTCGTGGG CCTCATATTG GTGGGGGTGA ACCTGCGGCC CGCACTGTCG
AGCCTGTCTC CCGTGCTCAA GCAGGTGGCC GCCGGCACCG GTCTCTCGGG TGCCGCGGCC
GGTTTGCTGA CGACGTTGCC CGTGGTGTGC CTGGGCGTGT TTGCACCGGC CGCTGCGGTG
CTGGCCCGGC GGTTTGGCGC CGAACGCGCC GTGGGCGGCC TGCTGATCGC CCTTGCCGCC
GGTATCGCAT TGCGCAGTGC GGGCGGCGTG GCACCGCTCT TCATCGGCAC CCTGGCGGCG
GGTGCCTGCA TTGGCGTGAC GGGCGTCCTG CTGCCCGGTA TCGTCAAGCG CGATTTCGGC
CGGCAGGCAG ATCTGATGAC GGGCGTCTAC ACCATGGCCC TGTGCTTTGG CGCCGCCGTG
GCGGCTGGGG CGAGCGCGCC GCTGTCGGCT TGGCTGGGCG GCTGGCAGCC GGCACTCGCA
TTCTGGGCCT TGCCGGCGCT GCTCGCGTTT GTCGGCTGGT GGCCCCACAT GCGGCACGCG
CACGGTAAGG GCGCGGCCAT GCGCATTGAA CGGGTTTCGC TGTGGAACCA GCCGATCGCA
TGGCAGGTGA CCCTGCACAT GGGGCTGCAA TCGTCGCTGG CGTACTGCGT GTTCGGCTGG
CTGCCCGTGA TCCTGCAAGA CCGCGGGCTG TCGCCGGTGC AGTCGGGCGT GGTGGTGGCG
GTGTCGATTC TCGTGCAGCT CATCACGGCG CTCGGCGGGC CTTTCATTGC GAGGCTCGGC
CGAGACCAGC GGCCCGCCGT GCTGTTGATG ATGCTGATGT GCTGGGCTGG GCTGCTGGGC
TGCCTGTATG CGCCCCTCTC CACGCTCTGG TGGTGGGCCG TGCTCCTGGG CCTGGGCCAG
GGCGGCAATT TCAGCGTGGC GCTGTCATTG ATCGTGCTGC GCTCGGCCGA TGTGCGCGTG
GCGGCGAGCC TGTCGGCCAT GACGCAGGGC ATTGGCTATG TCATGGCCGC TGCTGGGCCC
TACCTGATGG GCGTGCTGCA TGACCTGACC GGAAGCTGGG CCGTGATGGG GTGGCTGTTC
AGCGCGATTG CGCTGGCGTC GATGGCCGTA GGCTCGCTTG CCGGACGCGA TCGTACCCTG
CACGCCGACG CGTGA
 
Protein sequence
MSATPSSPAS PHAERRSAGA LALLVVGLIL VGVNLRPALS SLSPVLKQVA AGTGLSGAAA 
GLLTTLPVVC LGVFAPAAAV LARRFGAERA VGGLLIALAA GIALRSAGGV APLFIGTLAA
GACIGVTGVL LPGIVKRDFG RQADLMTGVY TMALCFGAAV AAGASAPLSA WLGGWQPALA
FWALPALLAF VGWWPHMRHA HGKGAAMRIE RVSLWNQPIA WQVTLHMGLQ SSLAYCVFGW
LPVILQDRGL SPVQSGVVVA VSILVQLITA LGGPFIARLG RDQRPAVLLM MLMCWAGLLG
CLYAPLSTLW WWAVLLGLGQ GGNFSVALSL IVLRSADVRV AASLSAMTQG IGYVMAAAGP
YLMGVLHDLT GSWAVMGWLF SAIALASMAV GSLAGRDRTL HADA