Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4541 |
Symbol | |
ID | 6285354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 867614 |
End bp | 868531 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642619022 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_001893058 |
Protein GI | 187926713 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.191603 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.532762 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGAAG TCCGACATCT GCGCACACTG ATTGCCCTGG CCGATGGCGG CTCCGTCTCG CGTGCGGCGG AGCGGCTGCA TCTGACGCAG TCGGCCCTGT CGCACCAGTT GCGCGCGCTG GAATCGCACT ACGGTTTGGC GGTCGTGCGC CGCAAAGGAC AGACCGTGGA GCTGAGCGAG GCCGGCGAGC GCCTTCTGGA GCTGGCGCAG AAGGTGGTGG CCGACATCCA GGCTGCCGAG CGCGACCTCG AACGCATCAA GGGCCGTGCG GCTGGCACGT TGCGCATCGC GCTCGAATGC CACACGTGTT TCGACTGGCT CATGCCGGTC ATGGATGCCT TCCGCCAGCG CTGGCCGGAG GTCGAGATGG ACCTCGTGTC CGGCTTTCAT GCGGACCCGC TGGCGCTGCT CAAGGACGGG CGTGCCGACG TGGTGATCGG CTCCGATGCC AAGATGCGCC GCGGGGTGGT CTTTGCGCCG CTGTTTCGCT TCGAGATCCT CGCCGTGCTG CCGGTCGACC ATCCGCTGCG CAGCAGGAAG TGGCTCGAAG CGAAGGACTT CACCGACCAG ACGCTCATCA CCTATCCCGT GCCGGAAGAG CGCATCGACC TGATCCGCCA GGTGCTGACC CCTGCCGGCA TCGTGTTCAA TCGCCGCACG GCCGAGCTCA CCATCGCCGT GCTGCAGCTC GTGGCGAGCC GCCGCGGGCT GGCGGCCTTG CCGAGCTGGG GCATCAAGAA TTACGTTGAT TACGAATACG TCGTCGCCAA GCGTGTCGGA AAGGAGGGCT TGTGGAGCGA CCTCTATGCG GCGATGACGC GCGATTACGC GCAGGCCCCG TTTGCGCAGG ACTTTATCGA GACCGCCAAG TCGATCTGCT TTGCGCAGCT GCAGGGGTTG ATGCCGCTGG AGGGGTAA
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Protein sequence | MLEVRHLRTL IALADGGSVS RAAERLHLTQ SALSHQLRAL ESHYGLAVVR RKGQTVELSE AGERLLELAQ KVVADIQAAE RDLERIKGRA AGTLRIALEC HTCFDWLMPV MDAFRQRWPE VEMDLVSGFH ADPLALLKDG RADVVIGSDA KMRRGVVFAP LFRFEILAVL PVDHPLRSRK WLEAKDFTDQ TLITYPVPEE RIDLIRQVLT PAGIVFNRRT AELTIAVLQL VASRRGLAAL PSWGIKNYVD YEYVVAKRVG KEGLWSDLYA AMTRDYAQAP FAQDFIETAK SICFAQLQGL MPLEG
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