| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4534 |
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| Symbol | |
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| ID | 6285987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | + |
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| Start bp | 858510 |
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| End bp | 859856 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642619015 |
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| Product | homogentisate 1,2-dioxygenase |
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| Protein accession | YP_001893051 |
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| Protein GI | 187926706 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR01015] homogentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.233345 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.576048 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATGC TCGCCCCGAC GGCCAAGAAC GCATTCACCC CCGCGTCGCT GGACCGGCCC
GCTTACCAGA GCGGCTTCGG CAACGAGTTC TCCACCGAAG CCCTGCCCGG TGCGCTGCCG
CACGGCCAGA ACTCCCCGCA GAAGGCGCCG TATGGCCTGT ATGCGGAACA GATTTCCGGC
ACGGCGTTCA CCGCCCCGCG CGCGCACAAC CGCCGCTCGT GGCTGTATCG CATTCGCCCC
GGCGCCGTGC ATCTGCCGTT CGAGGCCATG GCGCAGGGCC GCTTCCACAG CCACTTCAAC
GAGGTGCCGC CCTCGCCCAA CCAGTTGCGC TGGGACCCGC TGCCCGCCCC GGCGGCCGGC
ACCGATTTCA TCGACGGCAT CGTCACCTTC GCCGGCAACG GCGGGCCCGA CGCGCAAACC
GGCTGCGGCA TCCACCTGTA CGCCGCCAAC GCGGACATGA CCGACCGCTT CTTCTACAAC
GCCGACGGCG AACTGCTGAT CGTCCCGCAG CAAGGCCGCC TGCGCCTGCT GACGGAGATG
GGCGTGGTTG ATGTCGAGCC GCTGGAGATT GCCGTTATTC CGCGCGGCGT ACGCTTCCGC
GTCGAGTTGC CGGACGGCGA CGCACGCGGC TACATCTGCG AGAACTTCGG CGCGCTCTTC
CGCTTGCCGG ACCTGGGCGT CATCGGCTCG AACGGCCTGG CCAACCCGCG CGACTTCCTC
ACACCGCACG CGTGGTACGA AGACCGCGAG GGCGCCTTCG AACTCGTCGC AAAATTCCAG
GGCAGCCTGT GGACCGCGAA GATCGGCCAC TCGCCGCTAG ACGTTGTGGC GTGGCACGGC
AACCTCGCGC CGTACAAGTA CGACCTGCGC CTGTTCAACA CCATCGGCTC GATCAGCTAC
GACCATCCGG ACCCCTCGAT CTTCCTGGTG CTGCAAAGCC CGTCCGCCAC GCCGGGTGTG
GACACGATCG ACTTCGTGAT CTTCCCGCCG CGCTGGCTGG CCGCCGAAAA CACGTTCCGC
CCGCCCTGGT TCCACCGCAA CGTCGCCAGC GAATTCATGG GCCTGATCCA GGGCGTGTAC
GACGCCAAGG CCGAAGGCTT CGTGCCCGGC GGCGCCAGCC TGCACAACTG CATGAGCGGC
CACGGCCCCG ACGCCGACAC CTTCGAGAAA GCCAGCAACA GCGACACCAC CAAGCCGCAC
AAGGTCGACG CCACGATGGC CTTCATGTTC GAAACGCCAG CGGTGATCCG CCCCACGCGC
TTCGCTGCGG AATCGGCGCA ACTTCAAGCC AAGTACTTCG AATGCTGGCA AGGCCTGAAG
AAACATTTCG ACCCGAGCAA GCGCTAA
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| Protein sequence | MNMLAPTAKN AFTPASLDRP AYQSGFGNEF STEALPGALP HGQNSPQKAP YGLYAEQISG
TAFTAPRAHN RRSWLYRIRP GAVHLPFEAM AQGRFHSHFN EVPPSPNQLR WDPLPAPAAG
TDFIDGIVTF AGNGGPDAQT GCGIHLYAAN ADMTDRFFYN ADGELLIVPQ QGRLRLLTEM
GVVDVEPLEI AVIPRGVRFR VELPDGDARG YICENFGALF RLPDLGVIGS NGLANPRDFL
TPHAWYEDRE GAFELVAKFQ GSLWTAKIGH SPLDVVAWHG NLAPYKYDLR LFNTIGSISY
DHPDPSIFLV LQSPSATPGV DTIDFVIFPP RWLAAENTFR PPWFHRNVAS EFMGLIQGVY
DAKAEGFVPG GASLHNCMSG HGPDADTFEK ASNSDTTKPH KVDATMAFMF ETPAVIRPTR
FAAESAQLQA KYFECWQGLK KHFDPSKR
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