Gene Rpic_4527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4527 
Symbol 
ID6285989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp851965 
End bp852852 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content68% 
IMG OID642619008 
Producttranscriptional regulator, IclR family 
Protein accessionYP_001893044 
Protein GI187926699 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0675359 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.540679 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATCA CCGAAGTCGA AGACGCGCTG CCGGCCGACG CCGATGCCGA AGACGCACGC 
ACTGGCCGTG ATCGTTCGGG CATCCAGTCC ATCGAGGTCG GCTCGCAATT GCTGGTTGCA
CTCACCCGTG CCATGCGCGC GATGGCGCTT GGTGACCTGG CGCGCGCGGC CGGCATGCAT
CCGTCCAAGG CGCATCGTTA TCTCGTGAGT CTGCAGCGCG TGGGAGCGGT CTCGCAGGAC
CCGCTGACGG GCCGCTATGA ACTCGGCCCC TTTGCGTTGC GCCTCGGATT GGCCAGCCTC
AACCGGAACG AGGCCATCGA GCGTGCCCGG CCCTTGCTGG CCGGCCTGCG GGATCGAACC
GGGCACACCA TCGGTATCGC AGTCTGGAGT GATCGCGGCC CCACCGTCGT GCATTGGGAG
AAGGCCGGAG GTGTGCCTGG GGTGAACCTG CGTATCGGCG ACGTCATGCC GATGCTCAAT
TCCGCCACCG GCCGCCTGTT CGGTGCCTAT CTGCCGATCG AACAGACGCT GCCGCTGGTC
GAGCGCGAAC TGCACGGCCG CGCGGGCGAT GACTTGCCCG ACCTGCCGCG CTCGCTGACC
GATTACTACC GTCTGTGCGA AGACATCCGC GAAGCGGGGG CCTCGTGGGT GGCCGGCAGT
CTGTTACCGA GCGTGAATGC GCTGTCGCTG CCCGTATTTG GCGCGCGCGG ACAATTGGCC
CTCGTGGTGA TCGCGCTGAA CCTGCGCGCG GTGTTCCATG CGGAGCGCGG CGGCGAGCTG
GAAGCGACGC TGCGTGCCTT CGTGACGCAG CTTTCTGCCA TGCTGCAGGC ACCGTCCGAC
CCGGCACCGG GGAAGGCATC CAACCGGCGC GCCAGACCGG CCCGTTAG
 
Protein sequence
MEITEVEDAL PADADAEDAR TGRDRSGIQS IEVGSQLLVA LTRAMRAMAL GDLARAAGMH 
PSKAHRYLVS LQRVGAVSQD PLTGRYELGP FALRLGLASL NRNEAIERAR PLLAGLRDRT
GHTIGIAVWS DRGPTVVHWE KAGGVPGVNL RIGDVMPMLN SATGRLFGAY LPIEQTLPLV
ERELHGRAGD DLPDLPRSLT DYYRLCEDIR EAGASWVAGS LLPSVNALSL PVFGARGQLA
LVVIALNLRA VFHAERGGEL EATLRAFVTQ LSAMLQAPSD PAPGKASNRR ARPAR