Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4526 |
Symbol | |
ID | 6285894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 850798 |
End bp | 851850 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642619007 |
Product | inner-membrane translocator |
Protein accession | YP_001893043 |
Protein GI | 187926698 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.141329 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.558956 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTTGT CGATTGCCGC CATCCTGGCG CAGGACGGCG TGACGTCGGG CGCGATCTAC GCGCTGCTGG CGCTGGCGCT CGTGCTGGTG TTTTCGGTCA CGCGCGTGAT CTTCATCCCG CAAGGGGAGT TCGTCGCATA TGGCGCGCTC ACGCTGGCGG CCGTGCAGTC CAACAAGGCC CCGCTGTCTG CCAGCCTGTT GGTGGTGCTG GGCGTGCTCA CGTTCCTTGT CGAGATGGGG CGTACGCTGC TGCAGCCGGA ACTGCGTCTG CATGCGCTGC GCACGGGCGC CCTCTACGCG GTGAAGTACC TGGTGTTTCC GCTGGCCATC TACGCTGCGG CCGCCGTACT GGCACCCATG ACCTTGCCGC AGGTGGTGCA GGTGGCGCTG GCGTTGCTGA TCGTCATTCC CATGGGGCCG ATGATCTACC GGCTGGCCTA CGAGCCGTTG GCCGAGGCCA GCACCCTGGT GTTGTTGATC GTCTCGGTGG GCGTGCACTT TGCGATGGTC GGGCTCGGCC TGGTGATGTT CGGCGCCGAA GGCTCGCGCA CGGATGCATT TTCCGATGCA CGATTCGACC TCGGCGCGTT GACGGTGTCC GGCCAGAGCC TGTGGGTGGT GCTGGTGTCG GCGTTGATGA TCGTGGCCTT GTACTTCTAC TTTGGCCGCA CCGTGTCGGG CAAGGCGTTG CGCGCAACGG CGGTGAACCG GCTGGGCGCG CGGCTGGTCG GCATCGGCAC CACGCAGGCC GGACGACTGG CCTTCACGCT GGCTGCCGCG TTGGGCGCGC TGTGCGGCAT CCTCATCGCC CCCATCACCA CGATTTATTA CGAGTCAGGT TTCCTCATCG GCCTGAAGGG CTTCGTGGGT GCAATCGTTG GTGGGCTGGT GAGCTATCCG GTTGCCGCGC TGGGCGCGCT GCTGGTGGGG CTGCTGGAGT CCTACGCTTC GTTCTGGGCT TCGGCGTTCA AGGAGGTGAT CGTGTTTACG CTCATCCTTC CCGTGTTGCT ATGGCGCTCG CTCACCACCA AGCATGTCGA GGAAGAGGAA TAA
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Protein sequence | MDLSIAAILA QDGVTSGAIY ALLALALVLV FSVTRVIFIP QGEFVAYGAL TLAAVQSNKA PLSASLLVVL GVLTFLVEMG RTLLQPELRL HALRTGALYA VKYLVFPLAI YAAAAVLAPM TLPQVVQVAL ALLIVIPMGP MIYRLAYEPL AEASTLVLLI VSVGVHFAMV GLGLVMFGAE GSRTDAFSDA RFDLGALTVS GQSLWVVLVS ALMIVALYFY FGRTVSGKAL RATAVNRLGA RLVGIGTTQA GRLAFTLAAA LGALCGILIA PITTIYYESG FLIGLKGFVG AIVGGLVSYP VAALGALLVG LLESYASFWA SAFKEVIVFT LILPVLLWRS LTTKHVEEEE
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