Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4521 |
Symbol | |
ID | 6285735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 846250 |
End bp | 847122 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642619002 |
Product | aminotransferase class IV |
Protein accession | YP_001893038 |
Protein GI | 187926693 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | [TIGR01121] D-amino acid aminotransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.419436 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTCGAA TCGTCTTCCT GAACGGCCAA TACGTGCCCG CCGCCGAAGC CACCGTTTCC ATCATGGACC GCGGCTTCAC CTTTGCCGAT GGCATTTACG AAGTCACCGC CGTGGTGCGC GGCAAGCTGG TCGATAACGA TGCCCACCTT GCGCGCCTGA CGCGCTCGCT GTCGGAGATC GGCATCGACA ATCCGTACAC CGGAGCGCAA TGGACGCGTG TGTGCGAAGC GCTGGTGGCG CGCAATGCCC TGGAAGAGGG CGTTGTCTAC ATGCAGGTGA CGCGCGGGGT GGCCGAGCGC GACTTTGGCA TTCCAGCAGA CATGACGCCC ACCGCAGTGG CCTTCACGCA AGTCAAGACC ATCGTTGACA ATCCGCTGGC GCGCAAAGGT GCGACCGTCA TCACCGTGCC CGACCTGCGC TGGAAGCGTT GCGACATCAA GAGCGTTGGC CTGCTTCCGC AGGTGATGGC CAAGCAGATG GGGGCCCGCG CCGGCGCGCA CGAAGCGTGG ATGACCGACG GCGATCGCGT GACGGAAGGC GCGTCGTCCA CGGCGTTCAT CATCACCGCA GACAAGCGGC TGATCACGCG TCCGCTGTCG AACGCCGTGC TGCCGGGCAT CACGCGCGTG TCGGTCATGG CCCTGGCGCG TGAGCATGGT CTCACGCTGG AAGAGCGGAC GTTTTCCATC CAGGAGGCTC AGCAGGCGGC GGAGGCGTTC TACACGAGTG CATCGACGTT CGTGATGCCG GTGGCGTCCA TCGACGGCGT GACGATTGGC AATGGGCAGC CGGGCCCGCT GACGCAGGCG CTGCGCGGGC TGTATCTGAA GTTTGCTGGT GCGGATGCAG CGGAGACCTC CGATCAGATG TGA
|
Protein sequence | MSRIVFLNGQ YVPAAEATVS IMDRGFTFAD GIYEVTAVVR GKLVDNDAHL ARLTRSLSEI GIDNPYTGAQ WTRVCEALVA RNALEEGVVY MQVTRGVAER DFGIPADMTP TAVAFTQVKT IVDNPLARKG ATVITVPDLR WKRCDIKSVG LLPQVMAKQM GARAGAHEAW MTDGDRVTEG ASSTAFIITA DKRLITRPLS NAVLPGITRV SVMALAREHG LTLEERTFSI QEAQQAAEAF YTSASTFVMP VASIDGVTIG NGQPGPLTQA LRGLYLKFAG ADAAETSDQM
|
| |