Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4509 |
Symbol | |
ID | 6285627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 837785 |
End bp | 838558 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642618990 |
Product | short chain dehydrogenase |
Protein accession | YP_001893026 |
Protein GI | 187926681 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGAGC GCAATTCAAC CGCCGGGCTG CTGGCTGGCC GCAAGGTGCT CGTGACGGGC GCCGCGCGCG GTCTGGGGCT GGCCTTTGCC AAGTCGATCG CCGAAGCCGG TGGCGCTGTC GCGCTGGCCG ACATTCTTGG CGAGCGCGTG CAGGAAGAGG CGGCGGCGCT GCGTGCGGCA GGTTTCGATG CGCATGGCTT CACGCTTGAT CTTGGCGATC CGGCTTCGAT TCAGGCGTGC GCTGCGGCAG CGGCGCAGGC ATTGGGCGGG CTCGACGGTC TTGTCAACAA CGCGGCCATT ACCAACTCGG GCGGGCGCGA CGCATCGTCG ATCGACATCG AGACCTGGGA CCGCGTGATG AACGTCAACG TGCGCGGCAC ATGGTTGATG ACGACGGCTT GCCTGCCGGC ACTCAAGGCA TCGGGCCGCG GCGCCATCGT CAATTTGTCG TCGGACACAC CGCTGTGGGG CGCGCCGAAC CTGTTGGCTT ACGTGGCCAG CAAGAGCGCT GTCATCGGCA TGACGAAGTC TCTGGCGCGC GAATGCGGCG CAGACGGCAT CACCGTCAAC GCCATCGCGC CGGGCCTGAC GCTGGTGGAA GCCACCGAAT ACGTGCCGGC GCACCGCCAT GCGCTGTACC GCGACCAGCG CGCCATTTCG CGCGATCAAC TGCCGGACGA CGTGTGCGGC GCCGTGCTGT TCGCGCTGTC CGACCTTTCC CGATTCGTGA CGGGCCAGAC GCTGGCCGTC AACGGCGGTT TTGTCATGCA GTAA
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Protein sequence | MPERNSTAGL LAGRKVLVTG AARGLGLAFA KSIAEAGGAV ALADILGERV QEEAAALRAA GFDAHGFTLD LGDPASIQAC AAAAAQALGG LDGLVNNAAI TNSGGRDASS IDIETWDRVM NVNVRGTWLM TTACLPALKA SGRGAIVNLS SDTPLWGAPN LLAYVASKSA VIGMTKSLAR ECGADGITVN AIAPGLTLVE ATEYVPAHRH ALYRDQRAIS RDQLPDDVCG AVLFALSDLS RFVTGQTLAV NGGFVMQ
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