Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4499 |
Symbol | |
ID | 6285720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 827328 |
End bp | 828428 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642618980 |
Product | porin Gram-negative type |
Protein accession | YP_001893016 |
Protein GI | 187926671 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0190258 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.402207 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACAA CCTTGTTCGC CATTGCGGCG ATGAGCCTGG CTGGCACCGC TGCGGCCCAG AGCAACGTGA CGCTGTACGG CAGCATTGAT GAAGGCGTGG CCTACATCAA CAGCCTCAAG AGCAGCGCGT CTAGCGGCTC GGCGCTGCGC ATGGACCCCG GCACCATGCA GCCGGACCGT TTCGGCCTGC GCGGCTCGGA AGATCTCGGC GGCGGTACGC AGGCCATCTT CCAGTTGGAA TCGGGGTTTC TGGGCGACAC CGGCAGCAGC GTGGTCGCCG GCAAGCTGTT CAACCGCACG GCGTGGGTGG GCCTGACGAA CGATCGCTTG GGCAATATCC AGCTTGGCCA CCAAGCGGAC TTCATGTTCG ACTACCTCGG CCGCCTGAGC AACGGGTTCC AGCTCACCAA TTTCTACCTG TTCCACCCCG GCAACTTCGA CAACCTGGCC AACCAGTTCC AGATCGACAA CGCCGTGCGC TACGTCTCGC CCATCTTCGG CGGCCTGCAA CTGGGCGGCA TGTACGGCTT TGGCGAGGTA CCCGGTTCGC CGTCGAAAAG CCGCAGTTAC AGCCTCGGTG CGTACTACAC CAACGGCGGG TTCCGTGCAG CCGCGGCTTA TACCGCGTCC AATGACCGCG CGCTGGACAT CGCCGGTCGC CTGGGTATCA CGAACACGCT CGGCACGACG CTCGTGCCCG GCGTGATGAC GCCGATGAGT TCGGTCAAGT CGTTCGGTGC CGGCACGCTG TATCAGTTCA GCAACCTGCC GGTCCAGATC AACGCGGTCT ATACGCAGAC CCGCATCACG CTGAGTGGCG CCAACGCCCG CGCGCAAAAC GTCGACCTCG GCACCGCGTG GCATTACAGC GCCGCCAATA CGCTCAACGT GGGCTATACC TTCAGCAAGT ACGAGGGCGC CCGCTGGAAC CAGTTCAGCC TCGGCAACGT GTACGCGTTT TCCAAGCGCA CGCAGGTGTA CGTGCAAGGT ACGTATCAGC GTGCGTCCGG CGATGCGCAG TCTGCTGCCA TCAACGGCGT AGGTGTGGCG GCGCAGCGCA ACCAGATGGT TGTCAGCACC GGGGTGCACC ACTCGTTCTG A
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Protein sequence | MKTTLFAIAA MSLAGTAAAQ SNVTLYGSID EGVAYINSLK SSASSGSALR MDPGTMQPDR FGLRGSEDLG GGTQAIFQLE SGFLGDTGSS VVAGKLFNRT AWVGLTNDRL GNIQLGHQAD FMFDYLGRLS NGFQLTNFYL FHPGNFDNLA NQFQIDNAVR YVSPIFGGLQ LGGMYGFGEV PGSPSKSRSY SLGAYYTNGG FRAAAAYTAS NDRALDIAGR LGITNTLGTT LVPGVMTPMS SVKSFGAGTL YQFSNLPVQI NAVYTQTRIT LSGANARAQN VDLGTAWHYS AANTLNVGYT FSKYEGARWN QFSLGNVYAF SKRTQVYVQG TYQRASGDAQ SAAINGVGVA AQRNQMVVST GVHHSF
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