Gene Rpic_4497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4497 
Symbol 
ID6285913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp824906 
End bp825784 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content63% 
IMG OID642618978 
Product2-hydroxy-3-oxopropionate reductase 
Protein accessionYP_001893014 
Protein GI187926669 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID[TIGR01505] 2-hydroxy-3-oxopropionate reductase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0494062 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.295932 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCA TCGGATTCAT CGGCCTGGGC ATCATGGGCG CCCACATGGC TCGCAACCTG 
CTCAAGGGCG ACCACACCCT GATCGTCAGC GGCAAACATT CCGTGCCGGA AGATCTGCGT
TCCCGCGCTA CCGTTGTCGC GAATTCGGCG GCGGTTGCGC AAGCAGCAGA CATCGTCATC
GCCATGGTGC CGGACACGCC GGACGTGGCC AATGTGCTGT TTGGCGAAGA CGGTGTCGCG
CAGGGCCTGG CTGCAGACAA GCTCTTCATC GACATGAGCT CGATCTCGCC GATTGAAACG
CAGGCCTTTG CCAAGCGCGT CGAAGCGCTG GGGGCGGATT ACCTCGATGC GCCCGTTTCA
GGCGGTGAAG TCGGCGCGCG CGATGCAACG CTCACGATCA TGGTCGGCGG CAAGGAAGCG
GCATTCGAGC GTGCCAAGCC GCTGTTTGCG CTGATGGGTA AGAACATCAC GCACGTGGGC
GACTCCGGTG CCGGGCAGAC CTGCAAGGTG GCCAACCAGA TCATCGTGGC GCTGACCATC
GAGGCCGTGG GCGAGGCGCT GCTGTTCGCA TCGAAGGCCG GGGCCGATCC GGCACGTGTG
CGCCAAGCGT TGATGGGCGG TTTTGCTTCG TCGCGGATTC TCGAAGTGCA TGGCGAACGC
ATGATCAAGC GGACGTTTGA CCCGGGCTTC CGCATCGAGC TGCACCAGAA AGATCTGAAC
CTGGCGTTGG AGGGCGCCCG CAAGCTCGGC ATCGCCCTGC CGAACACGGC CGCTGCACAG
CAGCTCTTCA ATGTGTGTGC GGCCAATGGC GGCAAGGCGT GGGACCACTC CGCCATGGTG
CGCGCGCTGG AACTGATGGC GGATCACACG ATTGCTTGA
 
Protein sequence
MATIGFIGLG IMGAHMARNL LKGDHTLIVS GKHSVPEDLR SRATVVANSA AVAQAADIVI 
AMVPDTPDVA NVLFGEDGVA QGLAADKLFI DMSSISPIET QAFAKRVEAL GADYLDAPVS
GGEVGARDAT LTIMVGGKEA AFERAKPLFA LMGKNITHVG DSGAGQTCKV ANQIIVALTI
EAVGEALLFA SKAGADPARV RQALMGGFAS SRILEVHGER MIKRTFDPGF RIELHQKDLN
LALEGARKLG IALPNTAAAQ QLFNVCAANG GKAWDHSAMV RALELMADHT IA