| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4490 |
|---|
| Symbol | |
|---|
| ID | 6285981 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010678 |
|---|
| Strand | - |
|---|
| Start bp | 813979 |
|---|
| End bp | 814935 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642618968 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001893009 |
|---|
| Protein GI | 187926664 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4544] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.287933 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.379352 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGCGT TGTCCTCGTC TCTTTTCATC GCCGAAGATG TGGCGAAATG CCATGCCCCC
GCCGTGCGCG AGGTGTCTAG GTTGCGTTCG CCCGCGCCGA AAGCCTCGAC GGCGCCATTG
CCGGAAACGC TGCATCCCGC ATTGTGGAGT GCAGGCCGTC TGGCGCGAGG CGGCGGGCGC
GTTCTGACCA CTGGATATGA TTCACTGAAT GCCGAGTTGC CCGGTGGTGG CTGGCCCCTC
GGCGGATTGA CCGAACTGCT GTGTCCACAA TCCGGTATTG GTGAATGCCG GTTGCTGCGC
CCGACGTTGT CTACGCTGTG CACGGGCGCA GGGCGCATCG CGCTGATTGC TCCACCGCAT
CTGCCGAATG CAGTGAGGCT GGTGGGCTGG GATTTCTCTC CTGAACAAAT CGTATGGGTG
CGGGCTGACA AGCCCGCTGA CCTTCTGTGG GCAGCCGAGC AGGTTCTACG CAGCAAGGCT
TTCGGCGGAG TACTGGTCTG GCTGAACCGG GCACGCCCAG GAGAGCTTCG CAGGCTGCAA
GTGTTGGCCC AGGCGGGAGA GAGCGCCATC TGGTTGTTCC GGCCGGCCCA GGCGCAGCGT
GAGTCGTCGC CGGCGGTGCT GCGGCTGGGG CTGGAGCCGG CTGGCGCCGA TGTGCTGTCC
ATCCTCTTCC ACAAGCGGCG CGGGCCGTTG CGTGAATCTC CATTGCTGCT GCCGTTGGCG
GATCCGCTTC GGGCCGGTCG CGCTTCTGTG CGTCCGTTGT CTGTGCCGCC CGTCGAGCCG
TTCATCATGG ATCCGGCCAC GGCGCAATTG CTGGCGGCGC TTTCGTCTCC TTCGTCTTCT
GTTGCGTTCG ATGCTTTGTC GGACGTTCCC GATCAAAACA CTCCCGATCA TGCCGTTCTG
GATCGCGGTG CATCTGCCCC GTCTCCCACT CGACGCGCTT CGACCGCGGT GGTCTGA
|
|---|
| Protein sequence | MFALSSSLFI AEDVAKCHAP AVREVSRLRS PAPKASTAPL PETLHPALWS AGRLARGGGR
VLTTGYDSLN AELPGGGWPL GGLTELLCPQ SGIGECRLLR PTLSTLCTGA GRIALIAPPH
LPNAVRLVGW DFSPEQIVWV RADKPADLLW AAEQVLRSKA FGGVLVWLNR ARPGELRRLQ
VLAQAGESAI WLFRPAQAQR ESSPAVLRLG LEPAGADVLS ILFHKRRGPL RESPLLLPLA
DPLRAGRASV RPLSVPPVEP FIMDPATAQL LAALSSPSSS VAFDALSDVP DQNTPDHAVL
DRGASAPSPT RRASTAVV
|
|---|
| |