Gene Rpic_4482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4482 
Symbol 
ID6285364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp802935 
End bp803468 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content64% 
IMG OID642618961 
Productprotein of unknown function DUF962 
Protein accessionYP_001893002 
Protein GI187926657 
COG category[S] Function unknown 
COG ID[COG4539] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.176253 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACCC TGTCTGACCA TCTTTCCAAC TACGCCGCTT ACCACCAGGA CGGCCGCAAT 
ATCGCCACGC ACTTTGTCGG CATTCCGGCG ATTGTGCTGG CGGTTGCGGT GTTGCTGTCG
CGGCCCGTGC TGGCAGACCT GTCTGGCGTG GCCGTAACAC CGGCACTGCT CGTGCTGGCG
CTGACGACGC TGTTCTACCT GCGTTTGGAC GCGATGTTCG GCGTGGTGAT GTTTGCGCTG
ATTGCCGTGT GCGTGTGGGC GGGCAACCAC GTGGCCGCAC ATTCGACGGC GGCCTGGTTG
TCAGTGGGCA TCGGCCTGTT CGTGATCGGC TGGATCATCC AGTTTGTCGG CCACTACTAC
GAAGGACGTA AGCCGGCGTT CGTCGACGAT CTGGCGGGCC TGGTGATTGG GCCGCTGTTC
CTGGTGGCCG AGACAGCGTT TGCCCTGGGT TTGCGCGCGA AGCTGCGTGA CGAGGTGGTC
AGCCGCTCGC ACGCCATGCG CGCCGCGATG GCGGTCAAGC ACGCCACCGC CTGA
 
Protein sequence
MRTLSDHLSN YAAYHQDGRN IATHFVGIPA IVLAVAVLLS RPVLADLSGV AVTPALLVLA 
LTTLFYLRLD AMFGVVMFAL IAVCVWAGNH VAAHSTAAWL SVGIGLFVIG WIIQFVGHYY
EGRKPAFVDD LAGLVIGPLF LVAETAFALG LRAKLRDEVV SRSHAMRAAM AVKHATA