Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4471 |
Symbol | |
ID | 6285467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 788910 |
End bp | 789593 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642618950 |
Product | HAD-superfamily subfamily IB hydrolase, TIGR01490 |
Protein accession | YP_001892991 |
Protein GI | 187926646 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0560] Phosphoserine phosphatase |
TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like [TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.470983 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0960522 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATCGC TTGCCCTGTT CGACCTGGAC CATACCCTGC TACCCATTGA CAGCGAATAC GAATGGGGCT GCTTTCTGGT CGCCCAGGGC GCGGTGGATC GAAGCGTCTT CGAGCGAGCC AACGAACGGT GGATGCGGGA GTACCGAGAC GGCACGCTCG ACTTTGCGCG ACACGCGCGC TTCTCGCTCG GCCTGCTGGC CCAGCACCCG CGCACGCGGC TCGACGCCTG GCGTGCGACG TTCCTGCGCG ACATCATCAC GCCAGCCATG CTGCCGCGCG CGCGGAAACT GGTCGACACA CACTTGCGCG CCGGCGATCT TTGCTGCATC GTCACCGCCA CGCACCGCTA CCTGGCCGAG CCGATTGCCG CCGCGTTCAA CGTGCCACAT CTGCTGGCGG TGGAAGGCGA GACCCTCAAC GGCCAGAGCG ATGGCGCCTT CACGGGTAAC CCGCTCGGCA CGGCCACGTT TGGCGCGGGC AAGATCGTGC GCGTCACGGA ATGGCTCGCA CAGCGCGGCC AGCGCATGAC GGACTTCTCG CGCACCGTGT TCTACAGCGA TTCATGCAAC GACCTGCCGC TGCTTGAAGC CGTTTCGCAT CCGGTGGCCG TGAGCCCCGA CAGCACTTTG CGTGCCGTGG CCGAATCGCG CGGCTGGCCC ATCGTCGAAC TCTTTCCTGC CTGA
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Protein sequence | MQSLALFDLD HTLLPIDSEY EWGCFLVAQG AVDRSVFERA NERWMREYRD GTLDFARHAR FSLGLLAQHP RTRLDAWRAT FLRDIITPAM LPRARKLVDT HLRAGDLCCI VTATHRYLAE PIAAAFNVPH LLAVEGETLN GQSDGAFTGN PLGTATFGAG KIVRVTEWLA QRGQRMTDFS RTVFYSDSCN DLPLLEAVSH PVAVSPDSTL RAVAESRGWP IVELFPA
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