Gene Rpic_4469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4469 
SymbolatpC 
ID6285586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp787273 
End bp787692 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content64% 
IMG OID642618948 
ProductF0F1 ATP synthase subunit epsilon 
Protein accessionYP_001892989 
Protein GI187926644 
COG category[C] Energy production and conversion 
COG ID[COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) 
TIGRFAM ID[TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0365154 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.135413 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGTGC TGAAGGTCGA TGTCGTCACG GCAGAAGAAC GGCTGTACGA AGGCAACGCC 
AAGTTTGTGG TGATCCCCGG CACCGAGGGC GAACTGGGCA TCTTGCCAGG CCATGAACGT
CTGCTGACGC GCATGCGCCC GGGCAGTGTC CGCGTCACGC AGGAGAACAA CGAAGAAGTG
ATCCTCTTTG TAGCCGGCGG CTTTGTCGAC GTGCAACCGG AGCAGGTGAT CGTGCTGGCA
GACACCGCCG TGCGCGCACA CGACCTGGAT GAGGCGAAAG CGCAGCAGGC CCGCAAGGCG
GCCGAGGAGC TTATGCAGAA CAGCCAAAGC AAATTCGACT ACGCACGCGC GCAGGCGGAG
TTGGCCGAAG CCGTCGCGCA ACTGGCCGCC ATCGAGCGTT TGCGCAAGCG CCGCCGCTGA
 
Protein sequence
MPVLKVDVVT AEERLYEGNA KFVVIPGTEG ELGILPGHER LLTRMRPGSV RVTQENNEEV 
ILFVAGGFVD VQPEQVIVLA DTAVRAHDLD EAKAQQARKA AEELMQNSQS KFDYARAQAE
LAEAVAQLAA IERLRKRRR