| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4463 |
|---|
| Symbol | |
|---|
| ID | 6285644 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010678 |
|---|
| Strand | + |
|---|
| Start bp | 778841 |
|---|
| End bp | 779500 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642618942 |
|---|
| Product | cysteine dioxygenase type I |
|---|
| Protein accession | YP_001892983 |
|---|
| Protein GI | 187926638 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5553] Predicted metal-dependent enzyme of the double-stranded beta helix superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.621561 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGC CTGCACTCGC CACCGTTTCC GCTGCTGCTT CCTCTGCGGC ACCCGTACAA
ACACAGTCCA TCGCGCCGCT GCGTGAGTTC GTGACGGCGC TGTCGCGCCT GCTGGATCAG
CAACCGACCG AAGCCGAAAT CCTCTCGCGC GCCGGTGCCC TGCTCGGTGC GCTCGTCGCC
CGCGACGACT GGTTGCCCGC TGAATACTCG CAGCCGCACC CAGAGCACTT CCAGCAGTTC
CTCCTGCATG CCGATTCCGG CGAGCGCTTT TCCATCGTCA GCTTTGTCTG GGGCCCGGGC
CAGCGCACAC CCATTCACGA CCACACCACG TGGGGCCTGA TCGGCATGCT GCGCGGCGCT
GAATACTCGC AGCCGTTCAA GCTCGACGCG CAAGGCAAAC CCCAACCCGA CGGCCCGGCC
ATCCGCCTGG AGCCGGGCGC TGTAGAACAC GTCTCGCCGC GCGTGGGGGA CATCCACCGC
GTGCACAACG CCTTTGACGA TCGCACCTCG ATCAGCATCC ACGTCTACGG CGGCAACATC
GGCGGCATCC ACCGTTCCGT CTACACGGAA GACGGCGAGC GCAAGCCGTT CGTCTCCGGC
TATTCGAATA CCCATCTGCC CAATCTCTGG GACCGTTCCA AGGACACGCC CGCATCATGA
|
|---|
| Protein sequence | MSTPALATVS AAASSAAPVQ TQSIAPLREF VTALSRLLDQ QPTEAEILSR AGALLGALVA
RDDWLPAEYS QPHPEHFQQF LLHADSGERF SIVSFVWGPG QRTPIHDHTT WGLIGMLRGA
EYSQPFKLDA QGKPQPDGPA IRLEPGAVEH VSPRVGDIHR VHNAFDDRTS ISIHVYGGNI
GGIHRSVYTE DGERKPFVSG YSNTHLPNLW DRSKDTPAS
|
|---|
| |