Gene Rpic_4436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4436 
Symbol 
ID6285454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp741850 
End bp743295 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content64% 
IMG OID642618916 
Productmembrane protein-like protein 
Protein accessionYP_001892957 
Protein GI187926612 
COG category[S] Function unknown 
COG ID[COG3174] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCAC TGCTGTCTTT CTCGGTTGCC CTGGGCGTGG GGCTGGCGAT CGGCCTTGAG 
CGCGAGCGGA GTCATGCCGA CAGCGCAGAG CTGCCAGCGG GCATGCGAAC GTTTGCGATC
GGGGCGCTGG CGGGTGCCAT CGCGGCAAGC CTGCCAATAC CATTTGCCGT GCCCACGGTG
CTGCTGACGG TCGCGGTGTT GGCGGCGGTC GGTTATCACC ATTCGGCCAA TGTTGATCCT
GGCGTGACGA CGGAATTCGC ACTGGTCGCG ACCACGCTGT TAGGCGCCTA TGCCGTGAGC
GAGCCCGAAA TGACGGCTGG CCTCGGCACG GTCTTACTTG TCCTGCTCTA TGCCAAAGCG
GGTTTGCATC GGTTTGCCCG CACGGTCATT ACCCAGCGTG AACTCGCCGA TCTGCTGATC
CTTGCCGTGG CGGCATTGCT GATCTGGCCC GCGGTTCCAG ACCGGAACTT GGGGCCGCTG
AACGCCTGGA ACCCGCACAC GTTGTGGCTG GTTGTGCTGC TTGTCATGCT GACAGGCAAC
ACGGGCCATT TTGCTGCGCG ATGGTTTGGA GAGCGGATCG GCTTGCCGCT GGCCGGCTTG
TTCAGCGGGT TTGCATCGAG CGTGGCCACG ATCACGGCCG TGGCAGCACG CGTGCGGCGG
GACCATCGCC CCGTTGATGG TGCGGTTGCC GCGGCGCTGC TGTCCAATGT CGCCACGCTG
GTGCAGATGC TGCTGCTGAT CGCTGCCATC AACATCGACT TGTTGCGCGT GCTGGCGGCT
CCGCTGGCGG TGGGCATGAT GGCGACCGTG GCATGGTCGG CGCTCTGGAT ATGGCGCGCC
AACGAGCCGC TCCAGGAGGC GCCGGAGAGT TCGGTGTCAT CCATCAACTG GCGCGTCGCA
ATCGGCTTTG CGCTGTGGAC GGCTGCCTTG CTGCTTGCCG CAGCTGCCGC GCGCACATGG
TTCGGGACAG CGGCGGTGGT GGCTGTCACC GTGTTTGGGG CGTTTGCCGA TGTCCATGCC
GCGACCGCTT CGATCGCAAC GCAGGTTGCC AGCCACACGT TGCAGACGCC GACGGCAGGC
GCGCTGGTGA TGCTTGCGCT GACAGCCAAC ACGTTCTCGA AGATTGTCGT GGCCATCAGC
GGAGGCCGCG CTTTTGCCGG TAAGGTCACC GCTGGTCTGC TGACCATGCT TCTGTCCAGC
TGGGCGGTGT TCTGGCTTGT CGCCTGGTCA ATGCCGCCCA ATGCCCAGCA CCCAATAGAG
CGGGCACATG CGGATCAGGC CGGTCACCAG AGGGATCAGC CCCAGCCAGC CAACCCATGC
TGGCACCTTG CCAAAAAATG CCAGCAGGAT CATGGCGATG CCGATCAGGA TGCGGACGGC
GCGGTCCGCG GTTCCAACAT TGGTAAACAT GACAGCGCTC CTGAAGAACG GTGGGTGAAC
ACTTAG
 
Protein sequence
MSSLLSFSVA LGVGLAIGLE RERSHADSAE LPAGMRTFAI GALAGAIAAS LPIPFAVPTV 
LLTVAVLAAV GYHHSANVDP GVTTEFALVA TTLLGAYAVS EPEMTAGLGT VLLVLLYAKA
GLHRFARTVI TQRELADLLI LAVAALLIWP AVPDRNLGPL NAWNPHTLWL VVLLVMLTGN
TGHFAARWFG ERIGLPLAGL FSGFASSVAT ITAVAARVRR DHRPVDGAVA AALLSNVATL
VQMLLLIAAI NIDLLRVLAA PLAVGMMATV AWSALWIWRA NEPLQEAPES SVSSINWRVA
IGFALWTAAL LLAAAAARTW FGTAAVVAVT VFGAFADVHA ATASIATQVA SHTLQTPTAG
ALVMLALTAN TFSKIVVAIS GGRAFAGKVT AGLLTMLLSS WAVFWLVAWS MPPNAQHPIE
RAHADQAGHQ RDQPQPANPC WHLAKKCQQD HGDADQDADG AVRGSNIGKH DSAPEERWVN
T