Gene Rpic_4416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4416 
Symbol 
ID6286035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp722695 
End bp724245 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content63% 
IMG OID642618896 
Producthypothetical protein 
Protein accessionYP_001892937 
Protein GI187926592 
COG category[S] Function unknown 
COG ID[COG2187] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.768574 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAC AAGCCACCAC CAATCCGTGC GCGCAGCCAG CAGAAGCCTT GGTCAGTCGC 
ATGCTCGATG CGGCAGCGTA TCCACACCCG GCGGCCGATC TGCAGATGAT CGAAACGCAT
CTGTCGTGGG TCTTCCTGGC TGGAGAATTT GCGTACAAGG TACGCAAGCC GGTCAAGTTG
GACTTCGTCG ATTTTTCGAC GCTCCTTGCG CGGCAAATCG ATTGCGAGGA GGAATGCCGC
CTCAACCGCC GCCTCGCCCC TGCGCTCTAC CTTGGCGTAG TGCCAATTTC GAACGATCCG
GCCACGGGGG CCATCCGCGT CAATGGGCAA GGCACGCCCT GTGAGTACGC AGTCTGCATG
CGCCGGTTTG CCCAGCAGGA CGTACTGATT GCGTTGGCTC GTGACGGGCG ACTTCGCCCG
AAAGAAATCG ACGCGCTGGC CGACCTGATC GCAGACTTCC ACGCAACCGC GCCGGTCGCC
AGCGCGAGTT CAGACGATGG AACGCCCTCA GGCATTCGGC GCACGTTCGA GGACTGCGCT
GCCGGAGTTA TTGCCTTGGG GCATGCACCG CTGGATGCGG CGACCACGGT ATCGCTGCTT
CGTCAGCACA CAGTTCGCCT CGAAGAGACA TTCGCTTCAC GCCGGCGCAG CCGCCACATC
CGCGAATGCC ATGGCGATCT GCACCTGGGC AACATCGTGT TGATCGATGG CCAGCCGACC
CCGTTCGACT GTCTGGAATT CTCACCGTCA CTGCGGTGGA TCGACACCAT GTATGACACC
GCCTTTCTGT TCATGGACCT GCTCGCCGCA GGTCTGGACG GGCTGGCGTA TCGACTCATC
AACCGTTATC TCGAACGATG TGGCGACTAT GGCGGGTTGG CAGTACTGCC CTTCTACGCA
TCGATGCGCG CGCTCGTGCG GGCTCGCGTA CTGCTGGAAC GCGCCCATCA GTTGGACGGG
GCCCCCGATG TGGCTGCCAG GCTCCGCCGC GAGGCAGGCC GCATGCTCGC CCTGTCTCGG
GAGCTGCTCT GCCGAAACGA CGCCTGCATT CTCCTCATGC ATGGCCTTTC AGGCAGCGGA
AAGTCCACCC GTGCCGCGCA GCTTGCCCAA GCGGAAGGCA TGATCCGTGT GCGCTCTGAT
GTCGAGCGCC AACGCCGCTG GCATGTCCGC GCAGTCGATC GCTATCTGCC ACGTGCAGTC
GAACGTACGT ATCGGCGTCT CGCCGCGATC TGCAAGCTCG GTGCAGGCGC TGGCTTTCCA
ATGATTGCGG ATGCCACATT CCTCGCCGAG CACCAGCGCC GACGTTTCTT CTCGCTGGGC
CGGCGGCTGG GGACAGCCGT GGCCATCGTG GACTGTGTTG CCGACGTCGA CACGCTGCGT
ACGCGCATCC GCAATCGCAT GCGCGGCGGG CGCGACGCAT CCGAGGCAGA CCTGCACGTG
CTGGACGCCC AGATCGCCAC ACAAGAGCCG CTCAACGTAG ACGAGCGGGC ACATGTTATT
CCTGGCGAAA TGTCCAAAGT GGTGCCATAC ATCAAAGGTA GAAGGCAGTG A
 
Protein sequence
MAEQATTNPC AQPAEALVSR MLDAAAYPHP AADLQMIETH LSWVFLAGEF AYKVRKPVKL 
DFVDFSTLLA RQIDCEEECR LNRRLAPALY LGVVPISNDP ATGAIRVNGQ GTPCEYAVCM
RRFAQQDVLI ALARDGRLRP KEIDALADLI ADFHATAPVA SASSDDGTPS GIRRTFEDCA
AGVIALGHAP LDAATTVSLL RQHTVRLEET FASRRRSRHI RECHGDLHLG NIVLIDGQPT
PFDCLEFSPS LRWIDTMYDT AFLFMDLLAA GLDGLAYRLI NRYLERCGDY GGLAVLPFYA
SMRALVRARV LLERAHQLDG APDVAARLRR EAGRMLALSR ELLCRNDACI LLMHGLSGSG
KSTRAAQLAQ AEGMIRVRSD VERQRRWHVR AVDRYLPRAV ERTYRRLAAI CKLGAGAGFP
MIADATFLAE HQRRRFFSLG RRLGTAVAIV DCVADVDTLR TRIRNRMRGG RDASEADLHV
LDAQIATQEP LNVDERAHVI PGEMSKVVPY IKGRRQ