Gene Rpic_4414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4414 
Symbol 
ID6286033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp720829 
End bp721482 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content63% 
IMG OID642618894 
Producthypothetical protein 
Protein accessionYP_001892935 
Protein GI187926590 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID[TIGR03605] SagB-type dehydrogenase domain 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.790049 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGG CGATGCTCCT GTCTTACGAC CCTGTGCAAC ATCTACTGCC ACAGCCGACG 
TCCCGTGCTG CGCCGGCAAC CATTGCACTG GCGTCGCCGC TATTGGATGG CGGCAATACG
TTGATTGCAG CGCTGACCAG GCGCAAGAGC GTGCGGGAGT TCGCGCCCAC GCCGCTGTCG
CTACAGCAGC TCAGCGAATT GCTGTGGGCG GCGAATGGCA TCAACCGGCC GGAAACAGGC
GGGCGCACCG CGCCTTCAGC GCACGGGCTG AACGAGATCG ACATCTACGT CGCCCTGCCG
GAAGGTGTCT ACCAATACGA GCCGGTGGCG CACCGGTTGC GGCTCAAGCA CGCCGTCGAC
GCGCGCAACC TTACCGGCTA TCAGGATTTT GTCGGCAAGG CGCCGCTCGA CCTGGTGTAC
GTGGTGAACC ATGCACGTGC AGACCAGATG CCGGAAGCCG TGCGTGAAAC CTTTGCCGGT
GTCGCGGCGG GAGCGATCTC CCAAAACGTG TCGCTTTACT GTGCCTCCGC CAAACTGGGT
TGTGTGGTAC GTGGCTGGCT CAATCATCGC CTTCTGGCAG AAGCCTTGTC GCTCAATGAA
GACGAAGTGC CGGTGCTGGC GCAGACGGTC GGCCACCCGG CCGCCGAGCG ATGA
 
Protein sequence
MSEAMLLSYD PVQHLLPQPT SRAAPATIAL ASPLLDGGNT LIAALTRRKS VREFAPTPLS 
LQQLSELLWA ANGINRPETG GRTAPSAHGL NEIDIYVALP EGVYQYEPVA HRLRLKHAVD
ARNLTGYQDF VGKAPLDLVY VVNHARADQM PEAVRETFAG VAAGAISQNV SLYCASAKLG
CVVRGWLNHR LLAEALSLNE DEVPVLAQTV GHPAAER