Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4393 |
Symbol | |
ID | 6286008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 701759 |
End bp | 703507 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642618874 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001892915 |
Protein GI | 187926570 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCGACC CAGGGAGCAA TCCCCGCATC TTCCTGTCGA CCGTCTTGCC CCGACCCAAT CAGCAGCGCC TGGTCACGGC AGTGATGCTG GCGTCCGTCG TGGTCTTTGT GGCCGTATTG CCGTTTGCTC AATGGCAGCT GGCGCCGGTC TGGGGGTTCA TTCCCGTCTA TGAATCCGCG GTCGTCATCA ACGACCTTGT CACCGCTGCG ATGCTGGTCG GGCAGTTCAC CCTGCTCCGC TCTCCAGGAT TGCTGGCCCT GTCATCGGGC TACTTCTTTA CCGCCACGGT CGCGGCGGTG CACATGCTCA GTTTCCCTGG GCTGTTCTCT GCATCGGGGC TTTTGGGTGC GGGCCCGCAA ACCACAGCGT GGCTTTACAT GTTCTGGCAC GGAGGGTTTC CACTGTCCCT GATCGGCTAT GCCCTTCTGC AAGAGAACGA GCGAATACGG CGTATCAGGT TGTCGCGCGC CGTCTCTCCC GTTCTATGGG CTGCCGGCGC CGTGCTGCTT TTGGCTTATG GGCTGACTGC GCTGGCGACC CACCCGTCTC TCCTGCCGGC CATCATGCGC GGGAACGGAT ATACCGGCGC CATGTCAACG ACAGTCAGCA TTGTGTGGAT GCTGAATGTG CTGGCCGCAG CAATTCTGTG GCGGCACCGC GGCCACTCGT TGCTGAATCT ATGGTGTACG GTGGTCGCCG TCACCTCGGC ATTTGAGGTG GCACTTTCTG CCGTGTTCAA CCACGGGCGG TTCGATCTCG GTTTTTACGC CGGCCGCGCC TATGGTCTTG TCGCTTCCGG CTTTGTTCTG GTCGGGCTGA TCATCGAACA TGCCAGGCTT TACGCCATGC TGGTGAAAGC ACTGGATAAC GAGAGCGCGG CGCGCGCAGG CGCCTTGGAG AAAACGCAAC AGCTGAACGC GGCGAACGAG CATCTCGAGC AGCGCGTCAA AGACCGCACC GCCCAACTGA GCGCTACGAA CAGCGAGCTT CGACAGGAAA TCACCGAGCG TAAGCGTGCC GAGCAGGCGC TCGAGCGCTC GAGAGAGGAA TTGCGTGAGC TGGCAGCGAT CAGCTCAAGG GCACGTGAGG AAGAGCGGCG GCGCCTTTCA CGCGAGCTTC ACGATGAGCT TGCCCAATCG CTGGCAGCGC TTAAGGTCGA CATGCAAATG TTGGAGCACA AGCTTGATGC CACGAACGCG CCGGTTGCCG AACGCTTGAG CGCAATGGAA CACGCCGTAG ATGACATGAT CCGAGCGACA CGTCGTCTCG CGTCCGATCT GCGCCCCTCC ATGCTCGATG ATCTCGGCCT CGTACCTGCG TGCAGATGGC TTGTCGAGTC GTTTCAACGG CGGCACCGCA TTCATTGCGA ACTGAAGATC GTACCCGGGC ACTTGGAACT TCCCGAGCCT TTTGCATCCA CCGTATATCG TGTCCTGCAG GAGTGCCTGG CCAATGTAGC GCGCCATGCC GGCGCGTCGG CTGTACATGT ACGGCTGCTC TATGAGGCGT CCATCGTCCA GCTTTCCGTG CAGGACGATG GCATCGGTTT TGACCCCGCG CATCCGAGAA AGGATCTGTC TTTCGGGCTT GTGGGCTTGC GTGAGCGCGC CTATCTTGTG CGCGGCAGCT TAAGCATCGA ATCGTCGCCA GAATCCGGAA CGTTGATCGA ACTCACCATT CCGCAAACGA TGGTCACATC TCCGCAATTG CCGCTGCCAG CTCCCGGTGC CGAGCCCAAG GCAATGTAA
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Protein sequence | MSDPGSNPRI FLSTVLPRPN QQRLVTAVML ASVVVFVAVL PFAQWQLAPV WGFIPVYESA VVINDLVTAA MLVGQFTLLR SPGLLALSSG YFFTATVAAV HMLSFPGLFS ASGLLGAGPQ TTAWLYMFWH GGFPLSLIGY ALLQENERIR RIRLSRAVSP VLWAAGAVLL LAYGLTALAT HPSLLPAIMR GNGYTGAMST TVSIVWMLNV LAAAILWRHR GHSLLNLWCT VVAVTSAFEV ALSAVFNHGR FDLGFYAGRA YGLVASGFVL VGLIIEHARL YAMLVKALDN ESAARAGALE KTQQLNAANE HLEQRVKDRT AQLSATNSEL RQEITERKRA EQALERSREE LRELAAISSR AREEERRRLS RELHDELAQS LAALKVDMQM LEHKLDATNA PVAERLSAME HAVDDMIRAT RRLASDLRPS MLDDLGLVPA CRWLVESFQR RHRIHCELKI VPGHLELPEP FASTVYRVLQ ECLANVARHA GASAVHVRLL YEASIVQLSV QDDGIGFDPA HPRKDLSFGL VGLRERAYLV RGSLSIESSP ESGTLIELTI PQTMVTSPQL PLPAPGAEPK AM
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