Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4369 |
Symbol | |
ID | 6285971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 671732 |
End bp | 672436 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642618850 |
Product | ABC transporter related |
Protein accession | YP_001892891 |
Protein GI | 187926546 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAAACGG TGTTCAATAT TCAGGCCGTC AGCAAGGTCT ACCCAATGGG GAGCGTGAGC GTGCGCGCTC TGGAACACGT CGACCTGGAA CTCGGGCCGG GTGAAATCGT TGTGCTGCTC GGGGCGTCGG GTAGCGGAAA ATCCACGCTA CTCAACCTGA TGGGCGGGCT GGATACACCA ACGAGCGGTT CCATCGTGTA TCGGGACCAC GATCTTTCCC ACGCGGGAGA CCGGGGCCTG ACGCGTTTCC GACGGGAACA TGTTGGATTC GTCTTTCAGT TCTACAACCT GATTCCAAGC CTGACTGCCC GCGAGAACGT CGCACTGGTG ACGGACATCG CGGAGCATCC GCTGGATCCC ACTGAGGCTC TGAACAGGGT CGGGATCGGG ACGCTTGCGG ATAACTTTCC CTCACAGATG TCGGGTGGTG AGCAGCAACG CGTTGCCATC GCCCGCGCGG TCGCAAAACG GCCAGATGTC CTTCTGTGCG ATGAGCCGAC CGGCGCACTG GATTTTCGGA CCGGGCAACT GGTGCTGGAG GTGCTCGAAC AGGTGAACCG CGAGTTCGGC ACCCTGATCG TGATCGTCAC GCACAACGCC GTCATCGCCG ACATGGCGGA TCGTGTCGTT CGTATGAGCA GCGGCACCAT TGTCGAGCAC CGCCGAAACG GGCAGCGTGC CCGAGTCGGA GACCTGGCAT GGTGA
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Protein sequence | METVFNIQAV SKVYPMGSVS VRALEHVDLE LGPGEIVVLL GASGSGKSTL LNLMGGLDTP TSGSIVYRDH DLSHAGDRGL TRFRREHVGF VFQFYNLIPS LTARENVALV TDIAEHPLDP TEALNRVGIG TLADNFPSQM SGGEQQRVAI ARAVAKRPDV LLCDEPTGAL DFRTGQLVLE VLEQVNREFG TLIVIVTHNA VIADMADRVV RMSSGTIVEH RRNGQRARVG DLAW
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