Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4362 |
Symbol | |
ID | 6285961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 664979 |
End bp | 665563 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642618843 |
Product | beta-Ig-H3/fasciclin |
Protein accession | YP_001892884 |
Protein GI | 187926539 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2335] Secreted and surface protein containing fasciclin-like repeats |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACGGT ATCAACTCGC AGGGTTGTCT GGTGTTCTGG TTTCTTTCGC AATCATTTCT GGCGGCTATG CGTCCGTAGC GGCGGCCGCA ATGGGCGATA GCGAAGCGAC CACCATGGTG GGCGGCGCTC CGATGTATCC GTCCAAGAAC ATTATTCAAA ATGCGGTCAA TTCGAAGGAT CACACCACGC TTGTTGCTGC CGTGAAGGCA GGCGGCTTGG TCGATACGCT GTCCGGGGCA GGCCCATTCA CCGTATTTGC ACCGACCAAC GAAGCCTTTG CGGCGCTGCC CGCCGGTACG GTCGATAAGT TGCTCAAGCC TGAAAGCAAG CCGACCTTGG TCAAGGTGTT GACCTATCAC GTGGTGCCCG GCCGGCTCAC AGCACAAGAC CTGATGAAGG CCGTCGCCGA TGGCGGCGGC AAGGCGATGC TCAAAACCGT CGAAGGTGAT CCGCTCACCG TCATGCAGAA GGGCGACCAT CTGACCGTCA CCGACGACAA GGGCGGGGTC GCCATGGTCA CTATCGGCAA TGTGTACCAG TCGAACGGCG TGATTCACGT CGTGGACAAG GTATTGATGC CGTAA
|
Protein sequence | MKRYQLAGLS GVLVSFAIIS GGYASVAAAA MGDSEATTMV GGAPMYPSKN IIQNAVNSKD HTTLVAAVKA GGLVDTLSGA GPFTVFAPTN EAFAALPAGT VDKLLKPESK PTLVKVLTYH VVPGRLTAQD LMKAVADGGG KAMLKTVEGD PLTVMQKGDH LTVTDDKGGV AMVTIGNVYQ SNGVIHVVDK VLMP
|
| |