Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4354 |
Symbol | |
ID | 6285952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 658733 |
End bp | 659485 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642618835 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001892876 |
Protein GI | 187926531 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGATTTG TATGGATTAC TGGAGCTAGC GGCGCTGTGG GCTCCGCCCT GGCACGTCGC TTGAACAGCT CAGGCATTCC GCTGGTACTC ACAGCGCGAG ACCAGAAGAA GTTAGAACAG CTCGCTGACG CGCTCCAGCC GGCCTCGGTT CTTGTCTGCC CGGCCGACGT CACAGACCGC AGTAGCGCTC AGCTTGCTAT TGAAGCCGGT GTCACCCGAT TCGGCGCGCC GGCAGGCCTC GCACACTGCG TCGGATCGAT CATCGTCAAG CCGCTCCATT TGACTTCAGA GGACGATCTC AAGCAGGCGC TCGATGCGAA TTTCTTTTCG GCGTGGAATG CGTTGCGCTT GTTTGTGCAA CAAGCCGTTC ACCAAAAAGT GCACGCAAGC GCGGTCTTAA TCGGCTCGGT TGCCGCCACT GCCGGCTTCC CGAATCACGA GGCAATTGCT AGCGCGAAGG CAGCCGTCGC GGCGCTTGCG CAGTCAGCAG CTGCAACGTA TGCAGATCGC AATATCCGCG TGAACTGCAT TCACCCGGGG CTGACCTCGT CAGCAATGTC ATCTCGACTG ACAAGTGTTC CAACAGTTGC GGAGCGGCTT GCAAAGGCAA ATCCGCTGGG CAGGCTCGGA CAAGGAGACG ATACCGCGGC GCTTGCGGAA TTCCTGCTCA GCCCTGCAGC ATCCTGGATC ACCGGCCAAC AGATCGGCGT GGACGGTGGC CACGGGCGAT TGGTCACACC ACCAAAGTCA TGA
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Protein sequence | MGFVWITGAS GAVGSALARR LNSSGIPLVL TARDQKKLEQ LADALQPASV LVCPADVTDR SSAQLAIEAG VTRFGAPAGL AHCVGSIIVK PLHLTSEDDL KQALDANFFS AWNALRLFVQ QAVHQKVHAS AVLIGSVAAT AGFPNHEAIA SAKAAVAALA QSAAATYADR NIRVNCIHPG LTSSAMSSRL TSVPTVAERL AKANPLGRLG QGDDTAALAE FLLSPAASWI TGQQIGVDGG HGRLVTPPKS
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