Gene Rpic_4327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4327 
Symbol 
ID6285903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp631717 
End bp632547 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content61% 
IMG OID642618808 
ProductPhytanoyl-CoA dioxygenase 
Protein accessionYP_001892849 
Protein GI187926504 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.123683 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0438049 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGTGA CAGAGCAGAT GAAGCTGGAG CTGGCGCGCG ATGGCGCCAC CGTCGCCCGA 
GGCCTGTTTT CACCCGAACG TCTCAAGCGG ATGCGCGAGG CGTTCGATTA CGGGATTGCC
CACCCCAGCC CGCAGCACGG CTACGCCTTT GCAGGTACGC CGGATGAGCA TTTCAACGAC
TACGGCAACT TCGACAACCG CGATGTACAC GTCGCGACGG TCAAGGCGTT GGGACTCGAT
GAGTTTGTAG CGTCGCTCTG GGATTCCGAG CATGTGTGGT TCATCGGCGA GGAACTCTTC
ATCAAGAAGG GCGGCAGGGC CGGCCGATCG CCGTGGCACC AGGACACTTC GTACTATCCG
TTCAGCGGGC CGCAGTTGCT CAACATCTGG ACCTGCTTTG AGAAGATTCC CCGCAAGAAT
GCGCTGGAGG TCGTACGAGG CTCTCACCTT GGGGCGCAGT ACAACGGTAC CTCTTACAAC
GATCCCAACG ATCACACCAA GTCGCTGTGG GTCAACACCG ATTGGCCTCT ACTGCCCAAC
ATTGAAGCCG ACCGTGCAAG AGACCCAGCG TCGTGGGACG TTGTCTCGTG GGATCTGGAA
CCGGGCGATG CGCTGTTGTT CCACTCGGGC TCGCTGCACG GCGGTGCGCC CGTGACCCCG
GATTGCCCGG ATCGCCATAC GCTGGTTTAC CGGTTCTACG GCGACAAGCT GTTTTACCGG
CCCCTGCCAA CCGGAGGATG CAACTACGGC TACGACATCA GCAATCTCAA CGATCCGTCG
CTGACGCCAG GCGAGCCGTT CCGGGCGCCT TACTGCACGC AGGTGCGGTG A
 
Protein sequence
MQVTEQMKLE LARDGATVAR GLFSPERLKR MREAFDYGIA HPSPQHGYAF AGTPDEHFND 
YGNFDNRDVH VATVKALGLD EFVASLWDSE HVWFIGEELF IKKGGRAGRS PWHQDTSYYP
FSGPQLLNIW TCFEKIPRKN ALEVVRGSHL GAQYNGTSYN DPNDHTKSLW VNTDWPLLPN
IEADRARDPA SWDVVSWDLE PGDALLFHSG SLHGGAPVTP DCPDRHTLVY RFYGDKLFYR
PLPTGGCNYG YDISNLNDPS LTPGEPFRAP YCTQVR