Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4326 |
Symbol | |
ID | 6285902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 630659 |
End bp | 631630 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642618807 |
Product | glycosyl hydrolase, BNR repeat |
Protein accession | YP_001892848 |
Protein GI | 187926503 |
COG category | [R] General function prediction only |
COG ID | [COG4447] Uncharacterized protein related to plant photosystem II stability/assembly factor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.237541 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0660823 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAAA CGATTCTTAC CAGCATCGCG CTGTGCGCGG CTGCCGCAGT GTTTGCACAA ACGCCCGCCG AAGGCACAGT CGCCACCTGG AGCGCCAAGC CTGCGCATAC GTGGCCAGCG CCGACCAACA GGATGCTGCT GGACGCCACG CGCGCCGGAA AACGCATCGT CGCCGTGGGC GAGCACGGCA TCGTTCTGCT CTCCGACGAT GAAGGCCAGA CGTATCGGCA GGCGCGCACG GTGCCGGCGT CCGCCACGCT GTCGGCTGTC TCCTTTGCCG ATGAAAGGCA CGGCTGGGCA GTCGGGCAGT GGGGCGTGAT TCTCGCGACG AGCGATGGCG GTGAGACATG GCAAAAGCAG CGCATGGATA CGGCCGTCGA TCAACCGCTG TTCTCGGTGC TCTTTACAAA CGACCGCGAC GGCATTGCGA TCGGCCTGTG GTCTTTGATG CTGCAGACCC ATGACGGCGG TAAGACGTGG ACGAAAACGA CGCTGCCAAA ACCGCCCGGG GGCGGCAGGG CCGACCGCAA CCTGTACCAC GTGTTTGCGG ATGGCAAGGG CGCGTTCTAC ATCTCTGCCG AGCAGGGGAC GGTGCTCAAG TCGACGGATG GCGGCGCCAC TTGGGACTAT CTGGCAACCG GTGGAAAGGG CTCGCTCTGG TCGGGTGTAG CCATGCCCGA TGGGCGGATT GTGGTGGGTG GTCTGCTCGG CAGCCTGTTC CAGAGCAGCG ATGGTGGAGC GAACTGGCAA CCGTTGAAGG CCGAGACGAA GAGTTCGATC ACCGGTCTTG TGGCGTCGGG TAACGGGTTC GTTGCGGTTG GGCTGGATGG GCTCGTGCTC AAGCAGCGTG AAGACGGCGC GCCGCTGGCG GTTGCACAGC GTGAAGACCG CGCGGCACTC ACCGCCGCTG TGATCGACGC GGGCGGCAAG CCAATCCTGT TTTCGAAAGA GGGCGTGCTG GCTGGGCTCT GA
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Protein sequence | MMKTILTSIA LCAAAAVFAQ TPAEGTVATW SAKPAHTWPA PTNRMLLDAT RAGKRIVAVG EHGIVLLSDD EGQTYRQART VPASATLSAV SFADERHGWA VGQWGVILAT SDGGETWQKQ RMDTAVDQPL FSVLFTNDRD GIAIGLWSLM LQTHDGGKTW TKTTLPKPPG GGRADRNLYH VFADGKGAFY ISAEQGTVLK STDGGATWDY LATGGKGSLW SGVAMPDGRI VVGGLLGSLF QSSDGGANWQ PLKAETKSSI TGLVASGNGF VAVGLDGLVL KQREDGAPLA VAQREDRAAL TAAVIDAGGK PILFSKEGVL AGL
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