Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4318 |
Symbol | |
ID | 6285883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 618456 |
End bp | 619955 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642618799 |
Product | succinic semialdehyde dehydrogenase |
Protein accession | YP_001892840 |
Protein GI | 187926495 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.140672 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTTCA ACGTAATGAA CCACGACACC CAAGCTACTG CAGCGCTCCA GGCCCGCCTG CGCGACCCTT CATTACTGGA AACGCGCGCC TGGTTGGCCT CGGGATGGCA AGAGGCGTCC GACGGACGCT CGTTTGCGGT GACCAATCCC GCCACGGGCG AGATTCTGGC CCGCGTGGCC AGTTTGAGCG GTGCCGAAGT TGAGTCTGCA ATCACGGCCT CCGCACAAGC GCAGGCCGTT TGGCAGCGCC GCAGCAGCCA CGAGCGGGCC AAGCTGTTGC GTGCCTGGTT CGATCTGATG ATTGCCAACG CCGATGACCT AGCCCTGATC ATGACCTCGG AGCAGGGCAA GCCGCTGGCC GAAGCGCGCG GCGAGATCCT TTACGCGGCG TCGTTTGTTG AGTGGTTCGC GGAAGAGGCC AAGCGCATCT ACGGTGACGT CGCATCGCAT CCGCAGACCG ACAAGCGGAT CCTCGTCATT CGCCAGCCGG TCGGCGTGTG CGCGGCCATC ACGCCGTGGA ATTTCCCGGC GGCGATGATC ACCCGCAAGG TGGCGCCAGC CCTCGCTGCG GGCTGCTCGA TTATCGTGCG GCCGGCCGAC CTGACGCCGC TGACCGCGCT TGCACTGGCG GTGCTGGCCG AGCGTGCGGG CATTCCTGCC GGGGTGCTTC AAATCGTGTG TGGCCCATCG CGCGAGATCG GCGCGGTCCT GACGGCCAGC CCGGTCGTGC GCAAACTGTC CTTCACAGGC TCGACCGAGG TTGGCCGGGT GCTGATGAGC CAGTCGTCGC CGACGATCAA GCGGATGTCG CTCGAGCTGG GCGGCAACGC GCCGTTCATC GTGTTCGACG ATGCCGATCT CGATGCCGCC ATCGAAGGTG CGATGGCGTC GAAGTACCGC AACAGCGGCC AGACGTGCGT ATGCGCCAAC CGCTTTCTGG TGCAGGACGG CATCCACGAT CGCTTCGTCG AGGCGCTGGT GCGCCGCGTG GCGGAGCTCA AGGTCGGCAA TGGCGTGGAG CCAGGCGTGC AGCAGGGGCC GCTGATTCAG CAGTCAGCGT GCGAACACCT GCAAGCCATG ATCGACGATG CCGTCGGCAA GGGCGCGAGG GTTGTCGTTG GAGGCAAGGG CCATGCATTG GGTGGCACGT TCTTCGAGCC GACCGTGATT GCCGGCGCCA CGCCGGACAT GCGCGTGGCG CGCGAGGAAC TGTTCGGTCC GGTCGCGCCT GTGTTCCGCT TCCGCGATGA GGCAGAGGCG ATTGCTATGG CCAATGACAC CGAGTACGGC CTTGCCGCCT ATCTCTACAC CCGCGACAAC GCGCGCATCT GGCGGGTTGG TGAAGCGCTG GAGTACGGCA TGGTGGGCCT GAACACCGGT CTGATTTCCA ACGAGGTGGC CCCGTTCGGC GGCGTGAAGC AATCCGGTCT CGGCCGTGAA GGCTCGCGAT ACGGCATCGA CGAATACCTG GAAATCAAGT ACCTGTGCGC ACAGGTCTGA
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Protein sequence | MQFNVMNHDT QATAALQARL RDPSLLETRA WLASGWQEAS DGRSFAVTNP ATGEILARVA SLSGAEVESA ITASAQAQAV WQRRSSHERA KLLRAWFDLM IANADDLALI MTSEQGKPLA EARGEILYAA SFVEWFAEEA KRIYGDVASH PQTDKRILVI RQPVGVCAAI TPWNFPAAMI TRKVAPALAA GCSIIVRPAD LTPLTALALA VLAERAGIPA GVLQIVCGPS REIGAVLTAS PVVRKLSFTG STEVGRVLMS QSSPTIKRMS LELGGNAPFI VFDDADLDAA IEGAMASKYR NSGQTCVCAN RFLVQDGIHD RFVEALVRRV AELKVGNGVE PGVQQGPLIQ QSACEHLQAM IDDAVGKGAR VVVGGKGHAL GGTFFEPTVI AGATPDMRVA REELFGPVAP VFRFRDEAEA IAMANDTEYG LAAYLYTRDN ARIWRVGEAL EYGMVGLNTG LISNEVAPFG GVKQSGLGRE GSRYGIDEYL EIKYLCAQV
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