Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4313 |
Symbol | |
ID | 6285873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 612968 |
End bp | 614716 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642618795 |
Product | Poly-beta-hydroxybutyrate polymerase domain protein |
Protein accession | YP_001892836 |
Protein GI | 187926491 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
TIGRFAM ID | [TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.491519 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCACCG CCCCCGTGCC GTCTTCGCCG ACTGCAGAGC AGATCGACCT ACCATTTCAC GCGGCGCTTG CCCGCGCGTC CAATTCGCTT TCGATTGCAT CAATGCAACT GGCCCTGTTC GATTGGGCGC TGCATCTGGC CGGCTCACCG GGCAAGCGGC TGGATCTGTG GCGATTGGCG CTAACGCAGG CCCAACAACT CGAGGGTTAC ATCCGGAACT GCATGGCGTC CGGCCCTCAG AACGCGTGTC TTTGCGTCCA GCCGCCGGCC CGCGACCGTC GTTTCGCGGC CGACGAGTGG CGCCTGTGGC CGTTCAACGT GCTGCACCAG TCCTTCCTAT TGACAGAACA ATGGTGGGAG GCCGCCACGC GCGGCGTGTG GGGTGTCGCC AAGCACCATG AGGACGTGGT CGCCTTTGCT GCGCGTCAAT GGCTCGACAT GATGTCGCCG GGCAACCAAT TGGCAACCAA CCCCATTGTC CTGCGCCGGA CCTTTGAGCA GCACGGCACC AACCTTGTGC GCGGCGCGCT CAATGCGCTT GACGATCTGG AGCGCTCCAT GAGCGGCGCG CCGGCTGCCG GTACCGAACG CTTTATGGTG GGCCGCGATG TGGCCATCAC GCCCGGCAAG GTGGTCTTGC GCAACCGCCT GATCGAGTTG ATCCAGTACG CACCGGCTAC GGGCAAGGTC CAGGCCGAGC CCATCCTGAT CGTGCCGGCC TGGATCATGA AGTACTACAT CCTGGATCTG TCGCCGCAGA ACTCGCTGAT CCGCTATCTG GTCGAGCAGG GCCATACCGT GTTCTGCATC TCCTGGAAGA ACCCCGACGA GGCGGATCGC GCCCTCGACA TGGATGACTA CCTCAAGCTC GGCGTCTTTG CCGCGCTCGA TGCCGTCAAT GCCATCGTGC CGGGCCAGCG CGTCCACGCC GCCGGCTACT GCCTGGGGGG CACGTTATTG GCCATCGCTG CGGCTGCCAT GGCACGCGAT GGCGATGCAC GGCTGGCGTC CATGACGCTC TTTGCCGCGC AGACTGACTT TTGCGAGCCG GGCGAACTGG GCCTGTTCAT CGACGAGGCA CAGGTCAGCC TGCTTGAAGC GCAGATGGAG CAGACCGGCT ATCTGCGCGC CAGCCAGATG GCCGGGGCTT TCCAGATGCT GCGCTCATAC GACTTGCTGT GGTCGCGCCT GGTGGGCGAA TACTTGCTGG GCGACCGCGC ACCCATGAAC GATCTGATGG CCTGGAACGC CGATGCCACG CGCATGCCCG CGCGCATGCA CAGCCAGTAC CTGCGGCATC TTTTCCTGAA CGACGACCTG AGCGAGGGCC ACTATCCCGT CAACGGCAAG CCGGTGGCAC TCAACGAGAT CGATTTGCCC ATCTTCGTGG TGGGCACGCT GACCGACCAC GTGGCGCCCT GGCGCTCCGT CTACAAGCTG CATCACCTGA CCGAGGCGGA GCTGACGTTC GTGTTGACCA GCGGCGGTCA TAACGCCGGC ATCGTCAGCC CGCCCACCAA CTCGCATCGA AGGTTCCAGA TGCAGACACG CCACACAGGC GAGACATCGG CGGGGCCGGA TGACTGGCTG GCATCGGCGC CCGCCACCGA CGGTTCGTGG TGGCCGGCGT GGCACGCATG GCTCGTTGCA CATGCATCGG GCTCCGCGCT GGTCAAACCG CCGAAGATGG GCGTTCCAGG ATTGCCGCCA CTGGCCGACG CGCCCGGCAC CTACGTGCTG GAGAAATAG
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Protein sequence | MRTAPVPSSP TAEQIDLPFH AALARASNSL SIASMQLALF DWALHLAGSP GKRLDLWRLA LTQAQQLEGY IRNCMASGPQ NACLCVQPPA RDRRFAADEW RLWPFNVLHQ SFLLTEQWWE AATRGVWGVA KHHEDVVAFA ARQWLDMMSP GNQLATNPIV LRRTFEQHGT NLVRGALNAL DDLERSMSGA PAAGTERFMV GRDVAITPGK VVLRNRLIEL IQYAPATGKV QAEPILIVPA WIMKYYILDL SPQNSLIRYL VEQGHTVFCI SWKNPDEADR ALDMDDYLKL GVFAALDAVN AIVPGQRVHA AGYCLGGTLL AIAAAAMARD GDARLASMTL FAAQTDFCEP GELGLFIDEA QVSLLEAQME QTGYLRASQM AGAFQMLRSY DLLWSRLVGE YLLGDRAPMN DLMAWNADAT RMPARMHSQY LRHLFLNDDL SEGHYPVNGK PVALNEIDLP IFVVGTLTDH VAPWRSVYKL HHLTEAELTF VLTSGGHNAG IVSPPTNSHR RFQMQTRHTG ETSAGPDDWL ASAPATDGSW WPAWHAWLVA HASGSALVKP PKMGVPGLPP LADAPGTYVL EK
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