Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4311 |
Symbol | |
ID | 6285868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 610773 |
End bp | 612170 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642618793 |
Product | ATP-dependent RNA helicase DbpA |
Protein accession | YP_001892834 |
Protein GI | 187926489 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTCG AACCGACCGC CACGCCCTTC AGCACCCTAG CGCTCGCCCC GGCTGTGCTC GCGAACCTTG CGCAGCTAGG CTATACCGAC ATGACGCCGA TCCAGGCCGC AAGCCTGCCG ATCGCCCTTG CCGGCCACGA TCTGATCGCG CAGGCAAAAA CGGGCAGCGG CAAAACCGCT GCGTTTGCGC TGGCCCTGCT CGCACGGCTC GACGCGCGCA GCTTCGACGT GCAGGCGATG GTGCTGTGCC CTACGCGCGA ACTTGCCGAT CAGGTGGCGC AGGAGATCCG CCGCCTGGCC CGTGCCGAAG AAAACGTGAA GGTGCTGACG CTGTGCGGCG GCACACCGAT GCGCCCGCAG GCCGCAAGCC TGGAGCACGG CGCCCACGTC ATCGTCGGCA CGCCGGGCCG CATCATGGAC CATCTGGAGC GCGGCAATCT CGCGCTCGGT GCACTGAAGA CGCTGGTGCT GGACGAAGCA GACCGCATGC TCGACATGGG TTTCTTCGAT GACATTGCGA CGGTCGTGCG CCAATGCCCG GCCGACCGGC AAACGCTGCT GTTCTCGGCG ACGTACCCGG AAGGTATTGC AAAGCTGAGC CAGCGGATTC TGCGCAACCC GAAGGAAGTG AAGCTCGAAG AGCGCCACGA CGACAGCAAG ATCCGCCAGC GCTTCTACGA GGTGACCGAC AGCCAGCGGC TGCATGCGGT GGGGCAACTG CTCAAGCACT ACCGTCCGGT CAGCACGCTC GCGTTCTGCA ACACGAAGCA GCAATGCCGA GACCTGCTCG ACGTGTTGCG CGCGCAGGGC ATTCACGCGC TTGCGCTGCA TGGCGAACTC GAACAGCGTG AGCGCGACCA GGTGTTGATC CAGTTCGCGA ACCGCAGTTG CTCAGTGCTG GTTGCGACCG ACGTTGCCGC GCGAGGGCTC GATATCGCCC AGCTTGAAGC GGTGATCAAC GTTGACGTGA CGCCCGATCC CGAAGTGCAC GTGCACCGGA TTGGCCGCAC AGGCCGCGCC GATGAGAACG GCTGGGCGCT GAGCCTCGCC AGCATGGATG AGATGGGCCG CGTCGGCAAT ATCGAAGAGG CGATGGGCCG CGAGGTCGAA TGGCACCAGC TCGACGAGCT GGATACCGGC AATGACGCAC CACTGCTGCC GCCAATGGAA ACGCTGCAGA TTCTCGGCGG CCGCAAGGAG AAGATCCGCC CCGGCGATGT GCTGGGTGCG CTGACCGGCG ATGCGGGTTT TCGCGGCGAC CAGATCGGCA AGATCAACGT GACCGAATTC TCGACGTACG TTGCGGTCGA ACGCGGCATC GCGCGCGACG CGCTGCGCAA GCTCAACGCC GGCACGTTGA AGGGCAAGAA GGTCAGGGTT CGGCTGATGG ATGAATGA
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Protein sequence | MTLEPTATPF STLALAPAVL ANLAQLGYTD MTPIQAASLP IALAGHDLIA QAKTGSGKTA AFALALLARL DARSFDVQAM VLCPTRELAD QVAQEIRRLA RAEENVKVLT LCGGTPMRPQ AASLEHGAHV IVGTPGRIMD HLERGNLALG ALKTLVLDEA DRMLDMGFFD DIATVVRQCP ADRQTLLFSA TYPEGIAKLS QRILRNPKEV KLEERHDDSK IRQRFYEVTD SQRLHAVGQL LKHYRPVSTL AFCNTKQQCR DLLDVLRAQG IHALALHGEL EQRERDQVLI QFANRSCSVL VATDVAARGL DIAQLEAVIN VDVTPDPEVH VHRIGRTGRA DENGWALSLA SMDEMGRVGN IEEAMGREVE WHQLDELDTG NDAPLLPPME TLQILGGRKE KIRPGDVLGA LTGDAGFRGD QIGKINVTEF STYVAVERGI ARDALRKLNA GTLKGKKVRV RLMDE
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