Gene Rpic_4308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4308 
Symbol 
ID6285859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp607168 
End bp607959 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content69% 
IMG OID642618790 
Productethanolamine ammonia-lyase small subunit 
Protein accessionYP_001892831 
Protein GI187926486 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4302] Ethanolamine ammonia-lyase, small subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAAC ACACCCTCGT CCAGCTGAAT CCGTGGGCGC ACCTGCGCGC CTTTACCGAC 
GCCCGTATCG CGCTGGGCCG CGCCGGCAAC AGCCAGACGA CCGACGCCGT GCTGGCGTTT
GGCGTGGCGC ATGCCCAGGC GCGCGACGCC GTGCACCTGC CGCTCGATAG CGCAGCGGTG
GCGACCGCAC TGGGCGAAGC GGGCTTCACG GCGGTGACGG CGCACAGCGC GGCAGCCGAT
CGCGCGGAAT ACCTGCGCCG TCCCGACCTT GGCCGCCGCC TTGACGAGGC CAGCCGCGCA
AGACTTGGCG CGTTGCGGCC AGCGCAGCCG TTCGACGTTG TCTTCGTGAT TGCCGATGGG
CTCTCCGCAT TGGCGGTGCA AAGCCATGCA GTGCCGCTGC TATGCAGCGT GCGTGAGCGT
CTGCCGGCCG GCTGGTCGAT CGGGCCAGTC GCCATCGCAG AGCAGTCCCG GGTTGCGCTG
GGGGATGAGA TCGGTGCACT GCTGGGCGCG CGGCAGGTGG TGATGCTGAT CGGTGAGCGG
CCAGGGTTGA GTTCGCCTGA CAGCCTAGGC ATTTACCTGA CCTACGCCCC GCGTGTTGGC
CGTTCCGATG CGGAGCGGAA CTGCATCTCC AATGTGCGGC CGGCAGGTCT GACCTATGAC
CAGGCAGCGA CCCGGCTGGT GTTCCTGCTC AACGGCGCGC TGGCGCTGGG CCGCAGTGGC
GTCGACCTGA AGGACGACAC GCCGGCCGTT GCCTACGGGG CAGCCCGACT TGCCGAACGT
CACGACCCAT GA
 
Protein sequence
MPKHTLVQLN PWAHLRAFTD ARIALGRAGN SQTTDAVLAF GVAHAQARDA VHLPLDSAAV 
ATALGEAGFT AVTAHSAAAD RAEYLRRPDL GRRLDEASRA RLGALRPAQP FDVVFVIADG
LSALAVQSHA VPLLCSVRER LPAGWSIGPV AIAEQSRVAL GDEIGALLGA RQVVMLIGER
PGLSSPDSLG IYLTYAPRVG RSDAERNCIS NVRPAGLTYD QAATRLVFLL NGALALGRSG
VDLKDDTPAV AYGAARLAER HDP