Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4307 |
Symbol | |
ID | 6285858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 605599 |
End bp | 606852 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642618789 |
Product | D-amino acid dehydrogenase small subunit |
Protein accession | YP_001892830 |
Protein GI | 187926485 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCACA TCGTCATCGT CGGCGCCGGC ATATCCGGCG TCACCACTGC TTACACGCTC TCGCAACTCG GTTATCAGGT CACGGTACTC GACCGCCACC TGTATCCGGC CATGGAAACA TCGTTCGCCA ACGGCGGGCA GCTTTCCGCC AGCAACGCTG AAGTCTGGAA CAGCACTGGC ACGCTGCTCA AGGGCATCAA ATGGATGCTG CGCAACGATG CCCCGCTGCT GCTCAATCCC AAGCCCTCGT GGCACAAATA CTCGTGGATC GGCGAGTTCG TGGCCAGCAT CGCGCACTAC CGCCGCAACA CCATCGAAAC CACACGCATG GCCATCGAGG CACGCAAGCA TCTGTTTGCG ATGGCGGAAC GCGAGCAGAT CGATTTCGAC CTGCAGAAGC GCGGCATTCT GCACGTCTAT CACGACAAGG CCAGCTTTGC GGCAGCAGGC AAGGCCAACG CCCTGCTCGT CGCCGGCGGC CTTGAGCGCC ACGCCGTGAG CCCCGAGGAG ATTGCCGCCA TTGAGCCGAC GCTACGCGGC AACTACTACG GCGGCTACTT CACCGAATCC GACGCCACCG GTGACATCCA CAAGTTCACG CGGGGCCTTG CGCAGGCCTG CGAAAGGCGC GGCGTGCGCT TCATGCAAGG CGTGGATGTG CGCGATGTGC AAACCACTGA AGGCGGCGTC AGCCTCCTGC TGCAGACCAC GCTGGATGAC CGCCTTTCCA CCAGTGCGGC GAATATCGTT CAGGACCTTG CCGCCGATGC GATGGTCGTC TGCGCGGGCG TGGGCAGCCG GCATATCGCG CAACTGGTGG GCGATCGCAT CAACGTGTAT CCGGTCAAGG GTTATTCGAT CACGGTGCAC CTGGACGATG AAGCCAGCGT GCAAGGCGCG CCGTGGGTCA GCCTGCTGGA TGAGAGCGCG AAGATCGTGA CAAGCCGCTT GGGCACTGGC CGGTTCCGCG TGGCCGGCAC GGCGGAGTTC AATGGCTACA ACCGCGACAT CCGCGCCGAC CGCATCGAAC CCCTGGTGGC CTGGACGCGC CGCAACTTTG CGATTGGCAC GTCGCGCGTG GTGCCCTGGG CCGGCTTGCG CCCGATGATG CCGGACATGA TGCCGCGCGT CGGCCGTGGC AGGCACGCGC GCGTGTTCTA CAACACAGGC CACGGGCACC TCGGCTGGAC GCTGTCCGGC GCCACTGCCG CGATGGTGGG CGACGTGATC GCGCGAGATT GCCCGGTGCA TTGA
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Protein sequence | MTHIVIVGAG ISGVTTAYTL SQLGYQVTVL DRHLYPAMET SFANGGQLSA SNAEVWNSTG TLLKGIKWML RNDAPLLLNP KPSWHKYSWI GEFVASIAHY RRNTIETTRM AIEARKHLFA MAEREQIDFD LQKRGILHVY HDKASFAAAG KANALLVAGG LERHAVSPEE IAAIEPTLRG NYYGGYFTES DATGDIHKFT RGLAQACERR GVRFMQGVDV RDVQTTEGGV SLLLQTTLDD RLSTSAANIV QDLAADAMVV CAGVGSRHIA QLVGDRINVY PVKGYSITVH LDDEASVQGA PWVSLLDESA KIVTSRLGTG RFRVAGTAEF NGYNRDIRAD RIEPLVAWTR RNFAIGTSRV VPWAGLRPMM PDMMPRVGRG RHARVFYNTG HGHLGWTLSG ATAAMVGDVI ARDCPVH
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