| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4284 |
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| Symbol | |
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| ID | 6285793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | - |
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| Start bp | 583759 |
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| End bp | 584907 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642618767 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001892808 |
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| Protein GI | 187926463 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGT TCTCTCCTGT CGTTGCTGTG ATCGCCCTGG CAGCGGCCCT CGCTGTGGGC
GTGGTGGTCG GACGCAAGTG GCCTGCCGCC GTGCCGGCCG AGACTGCAAA ACCCGAAGCG
GGCCCGGCAT CTGCGCCGGC TGCCGCGTCG CGTCCGAAAC CGGACTCCAT TGAAATTCCT
TCTGGCGGCT TCGACCCCCA GCAGGTGAAG GTCGCGCAGG CCAGCCAGCT TTCGGTGCCG
GTGGAATTGT CCACACCCGG CAAGCTGGCC TACAACGCGG AGCGCACCAA GCTGGCGTCC
GCACGCGTGG CCGGCCGGCT TGATCACATC CTCCAGTTCG AAGGGGCGCT GGTGCGTGAG
GGCCAGCCGA TTGCCGAGCT GTACGCGCCG GACTACATCT CTGCGCAGAA GGAATACCTG
CTGGCGCTGA ATACCGCCCG CCAGCTCAAG GGCTCCAACA TGAAGGACTT GCAGGAAGAC
GCAGACGCCA CCGTGCAGTC CGCCGCAGGT CGCCTGCACG TGCTGGGCAT GTCCGATGCC
GATGTCGCGC AAATAGCCAA GCGCGGCACA CCGGCTGAAC ACCTGACGCT GCGCGCGCCC
ATCTCGGGCA CGATCGTCAA GCGCAACATG GACCCGGGCG CCTTCCTCAA CGTGGGCGAC
TCGTTCATGA GCATCGTCGA TACGCGTGTG CTGTGGTTTA CGGGCAATGT GTATGAGAAC
GACATTGCCA GCGTGCGCAT CGGTCAGCCG ATCTCGCTGC ACACGTCGGC GTATCCGGAC
CGCGAGTTCA CGGGCCGCGT GAGCTTCATC GCCCCAAACA TCGACCCGGC CACGCACACG
TTGACGGTGC GCTGCGACGT GCCGAACAAC GACGGCCTGC TGCGCCCCGA GATGTACGCC
ACGGCGCGCA TCCAGACCGG CACCGGCCAG GCCACGGTGG TGCCGAAGTC CGCCCTGGTG
AAAGACCATG GCAGCTACTT CGTGATCGTG CAGAGCGATG CTACGCACTT CAAGCGCGTC
GAAGTGCACG GCAAGGACAT CGGCACCGAC GGCAACTTTG CCGTGACGGC AGGGCTTGAG
GCTTCGTCGC AGGTGGTGGT GCGCGGTGCC GCGCTGCTTA ACGAGATGAT CGTCAAGGCA
GGAGCGTAG
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| Protein sequence | MKKFSPVVAV IALAAALAVG VVVGRKWPAA VPAETAKPEA GPASAPAAAS RPKPDSIEIP
SGGFDPQQVK VAQASQLSVP VELSTPGKLA YNAERTKLAS ARVAGRLDHI LQFEGALVRE
GQPIAELYAP DYISAQKEYL LALNTARQLK GSNMKDLQED ADATVQSAAG RLHVLGMSDA
DVAQIAKRGT PAEHLTLRAP ISGTIVKRNM DPGAFLNVGD SFMSIVDTRV LWFTGNVYEN
DIASVRIGQP ISLHTSAYPD REFTGRVSFI APNIDPATHT LTVRCDVPNN DGLLRPEMYA
TARIQTGTGQ ATVVPKSALV KDHGSYFVIV QSDATHFKRV EVHGKDIGTD GNFAVTAGLE
ASSQVVVRGA ALLNEMIVKA GA
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