| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4273 |
|---|
| Symbol | |
|---|
| ID | 6285771 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010678 |
|---|
| Strand | + |
|---|
| Start bp | 568936 |
|---|
| End bp | 570273 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642618756 |
|---|
| Product | beta alanine--pyruvate transaminase |
|---|
| Protein accession | YP_001892797 |
|---|
| Protein GI | 187926452 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
|---|
| TIGRFAM ID | [TIGR00508] adenosylmethionine-8-amino-7-oxononanoate transaminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0078691 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCCG CACCCCACCC GCTGGAAACC ACCGATCTGT CCTACTTCTG GATGCCGTTC
ACGGCCAACC GCCAGTACAA GGCCGCACCG CGCCTGCTGA CTTCCGCCCA GGGCATGTAC
TACCGTGACG GCGATGGCCG CGAGGTGCTG GACGGCACTG CCGGCCTCTG GTGCGTCAAC
GCCGGCCACT GCCGCAAGGA AATCGTCGAC GCCATCACGA CGCAGGCCGC CACGCTGGAT
TTCGCGCCCA CCTTCCAGAT GGGGCACCCC CTGGCGTTCC GCGCGGCAGA AAAAGTCGCC
GAGATCATGC CGGAAGGCCT GAACCGCATC TTCTTCGCCA ACTCCGGTTC CGAAGCGGTG
GATACGGCGC TCAAGATTGC GCTGGCCTAC CACCGCGCGC GGGGCGAAGG GCAGCGCACA
CGCCTGATTG GCCGCGAGCG TGGCTATCAC GGAGTGGGTT TCGGCGGCAT CTCGGTGGGC
GGCATTTCGC CGAACCGCAA GGCGTTCTCG GCGAACTTGC TGCCGGGTGT GGACCACCTG
CCGCATACGC ATGCGCCCGA GCACAACGCA TTCTCCAAGG GCCAGCCGGC CTGGGGCGAG
CACCTTGCCG ACGAACTGGA GCGCCTCGTC ACGCTGCATG ACGCGTCGAC CATCGCCGCC
GTCATCGTCG AGCCACTGGC GGGTTCCACG GGCGTGCTGG TGCCGCCCAA GGGCTACCTG
CAGCGTCTGC GCGCGCTGTG CGACAAGCAC GGCATCCTGC TGATCTTCGA TGAAGTCATC
ACCGGTTTTG GCCGCCTGGG CGCGGCAACG GCGGCCGAGT TCTTTGGCGT GACGCCGGAC
CTGCTGACGA TGGCCAAGGG CATCAACAAC GCCGCCGTGC CGATGGGCGC CGTGGCCGTG
CGCCAGTCGG TGCACGACAC CGTCGTCGAC GCCGGCGCGC CAGGCGCGAT CGAGCTGTTC
CACGGCTATA CGTATTCGGC CCACCCGCTG GCCGCGGCCG CGGCGGTGGC CGCGCTGGAC
CTGTATCGCA GCGAAGGGCT GTTCGAGCGC GCGCGTTCGT TGTCGCCGGC GTTCGAAGCG
GCAGCGCATT CGGTCAAGGG CGCGCCGCAT GTGAAGGACA TCCGCAACCT CGGCCTCGTG
GCCGGCATCG AACTGGAATC GCGCCCCGGC GCCGTGGGCG CGCGCGCTTA CGAAGTCTTC
CTGAAATGCC TGGAGCGTGG TGTGCTGGTG CGCTACACCG GCGACATCCT GGCGTTCTCC
CCGCCGCTCA TCATCGAAGA GGCGCAGATC GCGCGCATCT TCGACACCGT TCGTACCGTT
CTGCAAGAGG TAGCCTGA
|
|---|
| Protein sequence | MKPAPHPLET TDLSYFWMPF TANRQYKAAP RLLTSAQGMY YRDGDGREVL DGTAGLWCVN
AGHCRKEIVD AITTQAATLD FAPTFQMGHP LAFRAAEKVA EIMPEGLNRI FFANSGSEAV
DTALKIALAY HRARGEGQRT RLIGRERGYH GVGFGGISVG GISPNRKAFS ANLLPGVDHL
PHTHAPEHNA FSKGQPAWGE HLADELERLV TLHDASTIAA VIVEPLAGST GVLVPPKGYL
QRLRALCDKH GILLIFDEVI TGFGRLGAAT AAEFFGVTPD LLTMAKGINN AAVPMGAVAV
RQSVHDTVVD AGAPGAIELF HGYTYSAHPL AAAAAVAALD LYRSEGLFER ARSLSPAFEA
AAHSVKGAPH VKDIRNLGLV AGIELESRPG AVGARAYEVF LKCLERGVLV RYTGDILAFS
PPLIIEEAQI ARIFDTVRTV LQEVA
|
|---|
| |