| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4272 |
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| Symbol | |
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| ID | 6285766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | - |
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| Start bp | 567377 |
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| End bp | 568780 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642618755 |
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| Product | transcriptional regulator, GntR family with aminotransferase domain |
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| Protein accession | YP_001892796 |
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| Protein GI | 187926451 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.200991 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.884881 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTCG AACTCGATCC TTCTCATCCC CAGCGTACGT TGGTCGACCA GATCGTCCAA
GGCATTCGTG CGGCGGTCGA CAACCATTCT CTGCTGCCGG GCACGCGGCT GCCCTCGGTG
CGCAAGTTGG CCCAGGCGCA CGATGTAAGC ACTTTTACGG TGGCGGAGGC CTATACACGG
CTGGCGGCTC TGGGCGCCAT CGTGGCCCGG CCACGTTCGG GCTACCTCGT AGCGGCGCGT
ACACCCACCC AGCCGGCCCC CGTGGCCCCA CGCTGGGAGC CGCCCACGCT CAACGCGGCG
TGGCTGCTGT CGGATGTGTT TGCCGACCGC TCCATCTCCA TCAAGCCCGG CTGTGGCTGG
CTGCCGAACG ACTGGCTGGA CGAGCGCGGC GTACAGGAAG CCATGCGCAC CGTGAGCCGT
GTTTCCGCGT TGCGGGTGGC GGGCTACGGA CATCCGTGGG GCTATGCGCC GTTGGGCGAA
TACGTAGCGC AGTCGCTTGC GCTACGGGGC CTGCCGGTGG AACGGTCGCA AGTGCTGCTG
ACCAGCGGCG CCACGCAGGC GCTCGACCTG ATCGTCCGCA CGCTGTTCAA AGCCGGCGAC
GTCGTCGCGG TGGATGATCC GGGCTATTGC AACGTACTCC AGGTACTCAA GCTGGCCGGT
CTGCGCGTGG TCGGAGTGCC GCGCACACCG GACGGGCTCG ACACCGCGGC ACTGGAAGCC
ATCCTGCGCG CGGACGATGC CGACCGGCCG CGCGCCCTCT TCACCAGCTC CGTGCTGCAG
AACCCCACTG GCTCCTCAAT GACGGCGCAG AACGCCTATC GCGTGCTGCA ACTGGCCGAA
CAGCACGGCC TCTGGATCGT TGAAGACGAC CTGCACCGCG AGCTGGCCGA CCCCGCCGCC
CCGATGCTCA CCGCACTCGA CGGCCTGCGC CGCACGCTGT ACGTGAGCGG GTTCTCCAAG
ACGATCTCGC CCTCGTTGCG CGCAGGCTAC GTGGTGGCCG ATGCCGCCAT CACACGCGAG
CTGGCACGCA CCAAGATGGC AGTGGCGCTC ACCTCGTCGG AAATTACCGA GCGCATCGTG
CACGCGTTCG TCACCCGCCC CGTCTATGCC GAACACGTGG CGCGGCTGAT TGCGCGGCTC
GGAGAAGCGC ACACGCGCGT CGAAGCGCTC ATGCGTCAAC ATGGTGCCGA GCCGTTCGAT
ACGCCGGGCC GCGGCCTCTT CCTGTGGGCG CGGCTGCCCG GCCAGGCCGA CGCCTCCGCA
CTGGCCAATC GGGCTATCGA GCACAACATC TGGCTCGCGC CCGGTCAGTA CTTCCGGCCG
CATGACGAGC CGAGCCCGTG GCTGCGCTTC AACGTCGCGT ACTCCGCAGA ACCGGCACTC
TGGGAATTCC TCTTGCACGC GTGA
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| Protein sequence | MQLELDPSHP QRTLVDQIVQ GIRAAVDNHS LLPGTRLPSV RKLAQAHDVS TFTVAEAYTR
LAALGAIVAR PRSGYLVAAR TPTQPAPVAP RWEPPTLNAA WLLSDVFADR SISIKPGCGW
LPNDWLDERG VQEAMRTVSR VSALRVAGYG HPWGYAPLGE YVAQSLALRG LPVERSQVLL
TSGATQALDL IVRTLFKAGD VVAVDDPGYC NVLQVLKLAG LRVVGVPRTP DGLDTAALEA
ILRADDADRP RALFTSSVLQ NPTGSSMTAQ NAYRVLQLAE QHGLWIVEDD LHRELADPAA
PMLTALDGLR RTLYVSGFSK TISPSLRAGY VVADAAITRE LARTKMAVAL TSSEITERIV
HAFVTRPVYA EHVARLIARL GEAHTRVEAL MRQHGAEPFD TPGRGLFLWA RLPGQADASA
LANRAIEHNI WLAPGQYFRP HDEPSPWLRF NVAYSAEPAL WEFLLHA
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