Gene Rpic_4271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4271 
Symbol 
ID6285765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp566441 
End bp567184 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content64% 
IMG OID642618754 
Productacetoacetate decarboxylase 
Protein accessionYP_001892795 
Protein GI187926450 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4689] Acetoacetate decarboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.13698 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.618993 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATTA AGACCGTCCG CGAAACCGCC TTCGCGATGC CGCTCACGAG CCCCGCCTAC 
CCACCCGGCC CGTACCGCTT CATCCACCGC GAATTCTTCA TCATCACGTA CCGCACCGAC
CCGGCCAAGC TGCGCGCCAT GGTGCCGGAA CCGCTGGAAG TGCCCGAACC GCTGGTCGCC
TACGAGTTCA TCCGCATGGC CGACTCCACC GGCTTTGGCG ATTACACCGA AAGCGGCCAG
GTCATCCCGG TCACCTACGA AGGCAAGCCC GGCACGTACA CGCTGGCGAT GTACCTGGAC
GACCATCCGC CCCTGGCCGG CGGCCGTGAA ATGTGGGGCT TTCCCAAGAA GTTGGCAAGC
CCGAAGCTGG TGACCGACAA GGACACGCTG ATCGGCACGC TCGACTACGG CCCCGTGCGC
GTGGCCACCG GCACCATGGG TTACAAGCAC CGCGAGCTGG ATCTGGCCGA GCAGAAACGC
CGCCTGGAGC GCCCGAACTT CCTGCTCAAG ATCATTCCGC ACGTGGACGG CAAGACGGCG
CGCATCTGCG AGCTGTCGCG CAACCTCATG ATCGACATCG ACATGAAAGG CGCCTGGACG
GGCCCCGCGT CGCTGGAACT GGCGCACCAT GCACTGGCGC CCGTGGCCGA ACTGCCCGTG
CTGGAGATTG TCGAAGCCCG GCACATCATT GCGGACCTGA CCCTTGGCAT GGGCGAGGTT
GTATTCGATT ACTTGGCGCA GTAG
 
Protein sequence
MDIKTVRETA FAMPLTSPAY PPGPYRFIHR EFFIITYRTD PAKLRAMVPE PLEVPEPLVA 
YEFIRMADST GFGDYTESGQ VIPVTYEGKP GTYTLAMYLD DHPPLAGGRE MWGFPKKLAS
PKLVTDKDTL IGTLDYGPVR VATGTMGYKH RELDLAEQKR RLERPNFLLK IIPHVDGKTA
RICELSRNLM IDIDMKGAWT GPASLELAHH ALAPVAELPV LEIVEARHII ADLTLGMGEV
VFDYLAQ