Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4270 |
Symbol | |
ID | 6285764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 565602 |
End bp | 566387 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642618753 |
Product | 3-hydroxybutyrate dehydrogenase |
Protein accession | YP_001892794 |
Protein GI | 187926449 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.149446 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.650814 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGATT TGAAAGGCAA AGTCGCCGTC GTCACGGGTG CCGCCAGCGG CATCGGCAAG CAGATCGCCC TCACGCTCGC CAATTCGGGC GCGGCCATTG CCATCGTTGA CTTGAACGAA GACGGCGCCA AGGCCGTCGC CAAAGAGATC ACCGATGCAG GCGGCAAGGC GATCGGCCTG CGCATGGACG TGACCGATGA ACAAGCCGTG GACAGCGGCA TCGACCGCGT GGCCGAAGAA CTCGGCTCGG TCGACATCCT GGTCTCGAAT GCCGGCATCC AGATCGTCAA CCCGTTCGTG AGCTACTCGT TTGCCGACTG GAAGAAGATG CAGGCCATCC ACGTCGACGG CGCGTTCCTG ACCACGCGCG CCGCACTGCG CCACATGTAC AAGGACGACC GTGGCGGCGT GGTGATCTAC ATGGGCTCGG TGCACTCGCA CGAGGGCTCG CCGCTCAAAT CGGCCTACGT GGCGGCCAAG CATGCACTGC TCGGCCTGAA CAAGGTACTG GCCAAGGAAG GCGCGGCGCA TAACGTGCGC TCGCACGTGG TGTGCCCCGG CTTCGTGCGC ACGCCGCTGG TCGAAAAGCA GATTCCCGAA CAAGCCAAGG AACTCGGCAT CAGCGAAGAT GACGTGGTGA AAAAGGTCAT GCTGGGTGAT ACCGTGGACG GCGTATTCAC CACGGTGGAA GACGTGGCCG AGACGGTGCG CTTCCTGGCC ACGTTCCCAA GTGCCGCGCT GACCGGCCAA TCGTTCGTGG TGAGCCACGG CTGGTTCATG CAATAA
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Protein sequence | MSDLKGKVAV VTGAASGIGK QIALTLANSG AAIAIVDLNE DGAKAVAKEI TDAGGKAIGL RMDVTDEQAV DSGIDRVAEE LGSVDILVSN AGIQIVNPFV SYSFADWKKM QAIHVDGAFL TTRAALRHMY KDDRGGVVIY MGSVHSHEGS PLKSAYVAAK HALLGLNKVL AKEGAAHNVR SHVVCPGFVR TPLVEKQIPE QAKELGISED DVVKKVMLGD TVDGVFTTVE DVAETVRFLA TFPSAALTGQ SFVVSHGWFM Q
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