Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4268 |
Symbol | |
ID | 6285761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 562169 |
End bp | 564280 |
Gene Length | 2112 bp |
Protein Length | 703 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642618751 |
Product | sodium/hydrogen exchanger |
Protein accession | YP_001892792 |
Protein GI | 187926447 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.199403 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACGGCG TCGTCATCCT GTTGCTGGTG GCGGGCGGTC TGCTCGCGGT GGTGGCGCTG GTGCAGATGC TGGCCTCGCG GCTGACGTTG CCCGAGTCGA CCTTGCTGGC GCTGGCGGGC ATCGGCATCG GCGGCGCCTA TGTGATCTTG CGGAACAGCG CGCCTGCCTT TGCGACCACG TTCTTCGCGC CGCTCGTCGA TCCGAGTTGG CCGGCAGAGG CCTACCTGTG GCTGTTCCTG CCGCCGCTGT TGTTTCAGGC GGCGCTGTCG GTCGATGTGC GCAGCATGGC GCCGGACGCC GCGCCGATCC TGATGCTGGC CATCGTGGCC GTGGTGGTCG CCACGGGTGT GATCGGGCTT GCAGCGGCCG CCGTCACGCC GTTCGGCATC GTCACGTGCC TGCTGCTCGG CGCGATGATT GCCACGACCG ATCCGTCCGC CGTGATTGCG GTGTTTCGCG ACGTGGGCGC ACCGGCGCGG CTGATCCGCC TGGTGGAGGG CGAGGCGCTG CTGAACGATG CGGCTGCCAT TGCGATCATG GGCGTGCTGC TTGCCATGCT GACGGGGCAC GGCGGTGACG CCACCGTCGG CACCGGTCTG CGTGAACTGG CCAGGGCGTT CGGTGGCGGC GTGGTGTTCG GGTTGATTGC CGGGCGCATC GCCGCATTCC TGCTGCCGGC TCTGCGCGGC ATTGCTCAGG CCGAAGCCGC GTGGACGCTG GCGCTGCCGT ATCCGCTGTA TCTCGTGGCG GAAAACATGC TGGGCGTGTC GGGCGTGGTG TCGGTGGTCT GCGCGGGACT GGTGATCGGC GCGCTGGGAC GCACGCGCCT GACGCCGCGC AACTGGTCGC ACCTGCAACT GATTTGGGAG CAGATTGCGG CGCTGGCTGG AGCGGTCGTC TTTCTGTTGG CTGCGGTGCG CGTGCCGGAA CTGCTGCACG GCGCGGTGTG GAAAGACGCG CTGTGGCTCG CGGTGATCGT GCTGGCTGCA CTGGCGGCGC GCCTTGCCGT GCTGTTTGGC CTGTTGCCCG CGATGGCGTG GCTCAAGCTC TCCGCGCCGG TCAGCCATGC CTACAAACTG GCGATTGCAT GGGGCGGCCT GCGTGGTGCC GTCACACTGG TGCTGGCGCT GGGGGTGGCC GAGAACCAGG CCGTACACGC GGCCGATCGT CATTTTGTGA CCATCCTCGC CACCGGCTTT GTGCTGGTCA GCGTGCTCTT CAACGGCGCC ACGCTGCGCT GGGTGATGCG GTGGCTGGGG CTCGATCAGT TGTCGCCGCA AGAGCAGGCA CTGCAAGGGC AGGCGCTGAA CATGTCGACG GAGGAAGTGG AATCGACCAT GCGCCGCATC GGCGGGCACT TCCATTTCAC GTCGGGCGCG ACCGATCGGG CAGCGGAGGT GTATCGGCGG GAGGTCGCGG CCGGCGCGCT CGAACTGAAC CTTGAGGAAG CGCTGTCCGA ACGCGAACGC CTGACCATCG GCCTGGTTTC GCTCGCCACG CGTGAGCGCG AGTTGATTCC CGAATATGGC AACGGCCTCG TCTCGATCCG CAACCTCGAC GCGATGATGC GAAACACCGC CGACATGATC GACGCGGCCC GCACGGAGGG GCGCCTGGGC TACAAGCGCG CTTCGCGGCG CATCCTGGCC AAGCACGCCG GCTACCGGTT CGCGGTCTGG CTGCATCGTG TGGCGCATAT CGATCGCCCG CTGGCCAATG CGCTGGCCGA CCGCTTTGAA TTGCTCATTT GCCGCCAGAC GGTGCTCGAA CGCTTGCGCG CGTACAACCG TGCATCGCTG CAACCCGTGC TGGGTGAGCG CATGGCAGAC TTGCTCGATG GCGTGTTGAT CACCCGGATC GAGGCGGCCG AAGAGGGCCT GGCAGAGTTG CGCGAGAAGT TTGGCGGCTA CAGCGCTGCG TTGGAGAAGC GTCTGCTGGT GCTGTTTGCG CTGTACATCG GCCAGAGCAA AATCGACACG ATGCTGGCTG AAACCGTGAT CTCGAAAGAG GTCTACAAGC AGATCAGCTC GGTGATCCGC CGTGCCTGGA CGGCCGCGCT GCCGCGGCCG CCGCTGTCGA CTGCGCTGCG TATGCCGGCC GCGCCGGAGT AG
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Protein sequence | MNGVVILLLV AGGLLAVVAL VQMLASRLTL PESTLLALAG IGIGGAYVIL RNSAPAFATT FFAPLVDPSW PAEAYLWLFL PPLLFQAALS VDVRSMAPDA APILMLAIVA VVVATGVIGL AAAAVTPFGI VTCLLLGAMI ATTDPSAVIA VFRDVGAPAR LIRLVEGEAL LNDAAAIAIM GVLLAMLTGH GGDATVGTGL RELARAFGGG VVFGLIAGRI AAFLLPALRG IAQAEAAWTL ALPYPLYLVA ENMLGVSGVV SVVCAGLVIG ALGRTRLTPR NWSHLQLIWE QIAALAGAVV FLLAAVRVPE LLHGAVWKDA LWLAVIVLAA LAARLAVLFG LLPAMAWLKL SAPVSHAYKL AIAWGGLRGA VTLVLALGVA ENQAVHAADR HFVTILATGF VLVSVLFNGA TLRWVMRWLG LDQLSPQEQA LQGQALNMST EEVESTMRRI GGHFHFTSGA TDRAAEVYRR EVAAGALELN LEEALSERER LTIGLVSLAT RERELIPEYG NGLVSIRNLD AMMRNTADMI DAARTEGRLG YKRASRRILA KHAGYRFAVW LHRVAHIDRP LANALADRFE LLICRQTVLE RLRAYNRASL QPVLGERMAD LLDGVLITRI EAAEEGLAEL REKFGGYSAA LEKRLLVLFA LYIGQSKIDT MLAETVISKE VYKQISSVIR RAWTAALPRP PLSTALRMPA APE
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