Gene Rpic_4265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4265 
Symbol 
ID6285756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp557537 
End bp558679 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content66% 
IMG OID642618748 
ProductPepSY-associated TM helix domain protein 
Protein accessionYP_001892789 
Protein GI187926444 
COG category[S] Function unknown 
COG ID[COG3182] Uncharacterized iron-regulated membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.312937 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGAC CGGTGCTGTT CCGCTTGCAC TGGCTGATCG GGTTGTCGGC CAGTGTGGTG 
CTGGCCGTCG TTGGCGCCAC CGGCGCGCTG ATGGCGTACG AAGACGAACT GCTGCGCGCG
CTCAATCCCG GCGTGCTCAC CCTGCCCGCG CGCAGCGGAC CCGCGCCGAC GCTGCCGCAA
GTGGCGGCGC AGGCGCGCGC TGCCATGCCG GACCGCCCCG TCACCTTCAT CACCGCTGCG
TCCGACCCCA CCCAGCCGTG GCGCGTCTGG TATGCGTGGC CGCCCGGCAA ACACGGCGGC
AGCAGCCGCG GAGAGCTGCG CTACGTCGAT GCCACCACCG GCACGTTGCT GCCGGAGGCG
CGCGCGCAGC GCTTCTTTGC CACCGTCAAG CTGCTGCATC GAACGCTGCT TGCTGATGAG
ATCGGCAAGC AGATCGTGGG GGCCAGCACG GTGGGGCTCG TCGTGATGGC GCTGTCGGGC
TTGTACCTGC GTTGGCCGCG TCGCGTCACG AACTGGCGAA GCTGGCTTGT CATCCGATGG
AGCCGTGCGG GCCGCATCCG ATGGTGGGAC GTGCACACCG TCATCGGTAC GCTGGTGTTG
CCGCTGTATC TGCTGGCCGC CTTCAGCGGG CTGTATTGGG CATATGACTG GTACCGCGAT
GGCCTGCAGC GCTTGGCCGG CATGCCGGTT GTCTCCAAGG CAAAACCGGT GGAAGTCCCG
CGAAAACCGC TCGAAGATGC GGCAATTGAG CGCACGTGGA ACGCTTTCCG CGACAACGCG
TCGAACTATG GAACGGCCAC CCTCCGTATC GACGATGCCC GCTCGGGCCA GGTCGATATC
AACTGGCTGC CGGCCGATGC TCCGCACGAC CGCGCCTTCA ACCGATTGAC GCTGGACGCT
GCTACCGGCG CCGTCCTGCG CAACGAATCC TTCGCTGCAA AGCCGCCAAT GCAACGCCTG
CTGGCAGGCA TGTTGCCGCT TCACAATGGA CGCTATTTCG GCCCGATCGG CGTCGTGCTA
GTGTTGATCG GAGCATTAAT GCTGCCGGTA TTTGCAGCAA CAGGGTGGTG GCTGTATCTG
GATCGGCGCC GACGCGCGCA ACCGCAGCGC AAACACGCAT CCGCAGCGAC ACGTCCTTGC
TGA
 
Protein sequence
MLRPVLFRLH WLIGLSASVV LAVVGATGAL MAYEDELLRA LNPGVLTLPA RSGPAPTLPQ 
VAAQARAAMP DRPVTFITAA SDPTQPWRVW YAWPPGKHGG SSRGELRYVD ATTGTLLPEA
RAQRFFATVK LLHRTLLADE IGKQIVGAST VGLVVMALSG LYLRWPRRVT NWRSWLVIRW
SRAGRIRWWD VHTVIGTLVL PLYLLAAFSG LYWAYDWYRD GLQRLAGMPV VSKAKPVEVP
RKPLEDAAIE RTWNAFRDNA SNYGTATLRI DDARSGQVDI NWLPADAPHD RAFNRLTLDA
ATGAVLRNES FAAKPPMQRL LAGMLPLHNG RYFGPIGVVL VLIGALMLPV FAATGWWLYL
DRRRRAQPQR KHASAATRPC