Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4265 |
Symbol | |
ID | 6285756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 557537 |
End bp | 558679 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642618748 |
Product | PepSY-associated TM helix domain protein |
Protein accession | YP_001892789 |
Protein GI | 187926444 |
COG category | [S] Function unknown |
COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.312937 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCGAC CGGTGCTGTT CCGCTTGCAC TGGCTGATCG GGTTGTCGGC CAGTGTGGTG CTGGCCGTCG TTGGCGCCAC CGGCGCGCTG ATGGCGTACG AAGACGAACT GCTGCGCGCG CTCAATCCCG GCGTGCTCAC CCTGCCCGCG CGCAGCGGAC CCGCGCCGAC GCTGCCGCAA GTGGCGGCGC AGGCGCGCGC TGCCATGCCG GACCGCCCCG TCACCTTCAT CACCGCTGCG TCCGACCCCA CCCAGCCGTG GCGCGTCTGG TATGCGTGGC CGCCCGGCAA ACACGGCGGC AGCAGCCGCG GAGAGCTGCG CTACGTCGAT GCCACCACCG GCACGTTGCT GCCGGAGGCG CGCGCGCAGC GCTTCTTTGC CACCGTCAAG CTGCTGCATC GAACGCTGCT TGCTGATGAG ATCGGCAAGC AGATCGTGGG GGCCAGCACG GTGGGGCTCG TCGTGATGGC GCTGTCGGGC TTGTACCTGC GTTGGCCGCG TCGCGTCACG AACTGGCGAA GCTGGCTTGT CATCCGATGG AGCCGTGCGG GCCGCATCCG ATGGTGGGAC GTGCACACCG TCATCGGTAC GCTGGTGTTG CCGCTGTATC TGCTGGCCGC CTTCAGCGGG CTGTATTGGG CATATGACTG GTACCGCGAT GGCCTGCAGC GCTTGGCCGG CATGCCGGTT GTCTCCAAGG CAAAACCGGT GGAAGTCCCG CGAAAACCGC TCGAAGATGC GGCAATTGAG CGCACGTGGA ACGCTTTCCG CGACAACGCG TCGAACTATG GAACGGCCAC CCTCCGTATC GACGATGCCC GCTCGGGCCA GGTCGATATC AACTGGCTGC CGGCCGATGC TCCGCACGAC CGCGCCTTCA ACCGATTGAC GCTGGACGCT GCTACCGGCG CCGTCCTGCG CAACGAATCC TTCGCTGCAA AGCCGCCAAT GCAACGCCTG CTGGCAGGCA TGTTGCCGCT TCACAATGGA CGCTATTTCG GCCCGATCGG CGTCGTGCTA GTGTTGATCG GAGCATTAAT GCTGCCGGTA TTTGCAGCAA CAGGGTGGTG GCTGTATCTG GATCGGCGCC GACGCGCGCA ACCGCAGCGC AAACACGCAT CCGCAGCGAC ACGTCCTTGC TGA
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Protein sequence | MLRPVLFRLH WLIGLSASVV LAVVGATGAL MAYEDELLRA LNPGVLTLPA RSGPAPTLPQ VAAQARAAMP DRPVTFITAA SDPTQPWRVW YAWPPGKHGG SSRGELRYVD ATTGTLLPEA RAQRFFATVK LLHRTLLADE IGKQIVGAST VGLVVMALSG LYLRWPRRVT NWRSWLVIRW SRAGRIRWWD VHTVIGTLVL PLYLLAAFSG LYWAYDWYRD GLQRLAGMPV VSKAKPVEVP RKPLEDAAIE RTWNAFRDNA SNYGTATLRI DDARSGQVDI NWLPADAPHD RAFNRLTLDA ATGAVLRNES FAAKPPMQRL LAGMLPLHNG RYFGPIGVVL VLIGALMLPV FAATGWWLYL DRRRRAQPQR KHASAATRPC
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