Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4260 |
Symbol | |
ID | 6285751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 553278 |
End bp | 554432 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642618743 |
Product | oxidoreductase domain protein |
Protein accession | YP_001892784 |
Protein GI | 187926439 |
COG category | [R] General function prediction only |
COG ID | [COG0673] Predicted dehydrogenases and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.386178 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.399904 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACCG CTTCTCATGA GGCTGAACGT GAGCCGCAAG TCGCTCCCGC CCGCACCGTT CAGAGCCCGG TGCGTTATGC CGTGGTCGGC GCCGGGTGGA TTTCCCAGGC CGCATTTCTG CCGGGCGTGG CGCAAAGCGG CAATTCCGTC GTCACTGCGC TGGTCACCGG CGATGAGGCC AAGGCCACCG TACTGGCCGA CCGCTACGGC ATCGAGCACG TTCACGGCTA TGCCGATTAC GACCAGTTGC TCGCCGCTGG CGATATCGAC GCAATCTACC TCGCGCTGCC AAACGACATG CATCGGCAGT ACGCCCTTCC GGCCCTGCAG CGCGGCATCC ACGTCCTCCT TGAAAAGCCC ATGGCCACCA GCGAGGCCGA TTGCGAAGCG ATGATCGAAG CGGCCCGCAA CGGCAATGCA AAATTGATGA TCGCCTACCG CCTGCATTTC GAGCCGGCCA CACTGGCCGC CATCGAACTC GTGCGCGCAG GCAAACTTGG CCGCATTCGA GCGTTCTCGG CCATGTTCAG CCAATCGGTG GCGCCGTCCA ACCACCGCGC CAGCCACGGC TATTGGGCCG GGCCGGTGTC CGACATGGGC GTCTATCCCA TCAACGCGGT GCGCAACCTC TTTGGCGAAG AGCCGGTAGA GGTGTCGGCC TGTGGGGTTC GGGACCCGGA TCTGCCCTTC AACTTCGATG ACACTGTCAG CGTGACGCTG CGCTTTGCCG ACCACCGCGT CGCACAGTTC GTGGTCAGCT ACAGCGGCGC GAACATCGAC CAGTACCGCA TCCTGGGGAC CAAGGGGGAT CTGGAGGTCT CGCCCGGCTT CATGTTTGGC GTGGGCCTGA AGTACCGCGC CACGATCGAC GGCAAGACGC ACGAACAGGC GTTCGACGCG ACCGACCAGT TTGGCGGCGA GCTGCAGTAC TTCTCCGACT GCATCCTCAA CAACCGGGAA CCTGAACCCA ACGGCGAAGA AGGCTTGGCC GACGTGCGCG TCCTGGCCGC CATTGAGCGC GCGCTGGAAT CAGGACAGCC GCAGAACCTT GGGCCGTTCC AGCGTCAGGG CCGCATGGAG ACTGCGCAGG TGCGCAAGCT GCCACCCGTG CCCGCACCGG AACTGGTGGA CGCGGCTGAA CCCAGCAAGG GATAG
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Protein sequence | MNTASHEAER EPQVAPARTV QSPVRYAVVG AGWISQAAFL PGVAQSGNSV VTALVTGDEA KATVLADRYG IEHVHGYADY DQLLAAGDID AIYLALPNDM HRQYALPALQ RGIHVLLEKP MATSEADCEA MIEAARNGNA KLMIAYRLHF EPATLAAIEL VRAGKLGRIR AFSAMFSQSV APSNHRASHG YWAGPVSDMG VYPINAVRNL FGEEPVEVSA CGVRDPDLPF NFDDTVSVTL RFADHRVAQF VVSYSGANID QYRILGTKGD LEVSPGFMFG VGLKYRATID GKTHEQAFDA TDQFGGELQY FSDCILNNRE PEPNGEEGLA DVRVLAAIER ALESGQPQNL GPFQRQGRME TAQVRKLPPV PAPELVDAAE PSKG
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