Gene Rpic_4260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4260 
Symbol 
ID6285751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp553278 
End bp554432 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content64% 
IMG OID642618743 
Productoxidoreductase domain protein 
Protein accessionYP_001892784 
Protein GI187926439 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.386178 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.399904 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACCG CTTCTCATGA GGCTGAACGT GAGCCGCAAG TCGCTCCCGC CCGCACCGTT 
CAGAGCCCGG TGCGTTATGC CGTGGTCGGC GCCGGGTGGA TTTCCCAGGC CGCATTTCTG
CCGGGCGTGG CGCAAAGCGG CAATTCCGTC GTCACTGCGC TGGTCACCGG CGATGAGGCC
AAGGCCACCG TACTGGCCGA CCGCTACGGC ATCGAGCACG TTCACGGCTA TGCCGATTAC
GACCAGTTGC TCGCCGCTGG CGATATCGAC GCAATCTACC TCGCGCTGCC AAACGACATG
CATCGGCAGT ACGCCCTTCC GGCCCTGCAG CGCGGCATCC ACGTCCTCCT TGAAAAGCCC
ATGGCCACCA GCGAGGCCGA TTGCGAAGCG ATGATCGAAG CGGCCCGCAA CGGCAATGCA
AAATTGATGA TCGCCTACCG CCTGCATTTC GAGCCGGCCA CACTGGCCGC CATCGAACTC
GTGCGCGCAG GCAAACTTGG CCGCATTCGA GCGTTCTCGG CCATGTTCAG CCAATCGGTG
GCGCCGTCCA ACCACCGCGC CAGCCACGGC TATTGGGCCG GGCCGGTGTC CGACATGGGC
GTCTATCCCA TCAACGCGGT GCGCAACCTC TTTGGCGAAG AGCCGGTAGA GGTGTCGGCC
TGTGGGGTTC GGGACCCGGA TCTGCCCTTC AACTTCGATG ACACTGTCAG CGTGACGCTG
CGCTTTGCCG ACCACCGCGT CGCACAGTTC GTGGTCAGCT ACAGCGGCGC GAACATCGAC
CAGTACCGCA TCCTGGGGAC CAAGGGGGAT CTGGAGGTCT CGCCCGGCTT CATGTTTGGC
GTGGGCCTGA AGTACCGCGC CACGATCGAC GGCAAGACGC ACGAACAGGC GTTCGACGCG
ACCGACCAGT TTGGCGGCGA GCTGCAGTAC TTCTCCGACT GCATCCTCAA CAACCGGGAA
CCTGAACCCA ACGGCGAAGA AGGCTTGGCC GACGTGCGCG TCCTGGCCGC CATTGAGCGC
GCGCTGGAAT CAGGACAGCC GCAGAACCTT GGGCCGTTCC AGCGTCAGGG CCGCATGGAG
ACTGCGCAGG TGCGCAAGCT GCCACCCGTG CCCGCACCGG AACTGGTGGA CGCGGCTGAA
CCCAGCAAGG GATAG
 
Protein sequence
MNTASHEAER EPQVAPARTV QSPVRYAVVG AGWISQAAFL PGVAQSGNSV VTALVTGDEA 
KATVLADRYG IEHVHGYADY DQLLAAGDID AIYLALPNDM HRQYALPALQ RGIHVLLEKP
MATSEADCEA MIEAARNGNA KLMIAYRLHF EPATLAAIEL VRAGKLGRIR AFSAMFSQSV
APSNHRASHG YWAGPVSDMG VYPINAVRNL FGEEPVEVSA CGVRDPDLPF NFDDTVSVTL
RFADHRVAQF VVSYSGANID QYRILGTKGD LEVSPGFMFG VGLKYRATID GKTHEQAFDA
TDQFGGELQY FSDCILNNRE PEPNGEEGLA DVRVLAAIER ALESGQPQNL GPFQRQGRME
TAQVRKLPPV PAPELVDAAE PSKG