Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4256 |
Symbol | |
ID | 6285745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 547072 |
End bp | 548487 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642618739 |
Product | sigma54 specific transcriptional regulator, Fis family |
Protein accession | YP_001892780 |
Protein GI | 187926435 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1221] Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.118848 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.240547 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAACCG ATCGCTGGGC GTACGAAACG CTTGAGATTT TTGTCTGGGA AGGCCGTCAC GACATTGCCG ATCGTGTGGC GCGGTTCATG GCGCCGTTCG GGGCAGAGGT GATCCGCGCG GGCGGCATCG ACTTTCAGCC GGCCGAGCCT CGGCTCAAGC CCGCGGTGGC GGTGATCAGC GCCTCGGTGG TGGAAAGCGG CGGCTTTACG GTGCTCGACT GGCAGGCCGC GCAAGGCATG CCGGTAATCT GGGTGGCCTC GGACGCGCAG CATGATTCGA GCCGCTTCCC GCCCGAATAC ACGCACGTGC TCGGGCCGGA CTTTGGCGCG ACTGAACTGC GCGCGCAGAT CAGCAAGGTC TTGCCGTCGA TGTCGTCGGC GCAGGCCCAG GCGCAGGATC AGAGCGACCT CGTGGCGGCG TCGCCGGCCA TGCACGGGCT GCTGGAGCAG GTCGATACCT TTGCCGATTG CGACAGCAAC GTCATGCTTT ACGGCGAAAC CGGCGCCGGC AAGGAACGTA TTGCGCGCTT GCTGCATGAC AAGAACAGTG TCTATGGCAA GGGCCCGTTC GTGGCGGTCA ACTGTGGCGC GATTCCCGAC GGGCTGTTCG AATCCCAATT TTTTGGCCAT GCCAAGGGCG CGTTCACGGG CGCCATGTAT GCGCACCGCG GCTACTTTGA ACAAGCGAAC GGCGGCACGC TGTTTCTCGA CGAGCTGGGC GATCTGCCGC TGTATCAGCA GGTGAAGCTG TTGCGCGTGC TGGAAGACAG CGAATGCACG CGGCTGGGCT CGACGGTGCC GGTCAAGCTG GATTTCCGCC TGGTGGCCGC TACCAACAAG AATCTGCGCG AGATGGTCGC CACGGGCAAA TTCCGCGCCG ATCTGTACTT CCGCCTGGCG GTGATCGAGC TGCGCATCCC GAGCCTGGAG CAGCGCGGCG CGGATGACAA GATCGCGCTG CTGCTTTCCT TCCTGCGGCA TTTGCTGGGC GACAAAACGT TTGATGCCAT GCCGCCGGTG CCCGAATGGG TGCGGGCATC GGTCGGGCGG GCCTACTTTG CCGGCAATGT GCGCGAACTG CGCAACCTGG CCGAGCGCAT CGGCATCACC CTGCGCCAGT TCGGCCGCTG GGACGAGGCC CGCATCCTGC CGCTGTTTGC CGGCCTGCAG CGCGATGCGT TCGAGCGCGA GGCGGGAAAT GGTGGCAATG GCGGGTATGG CGATCGCGGT GGGGGTGGAA GTGGTGGCAA TGGCGGCGAA GAAGAGCGCC GCCGTATCCT CGCGGCGCTG GACGCCAACA ACTGGCGCCG CCAGGACACC GCCGCCACAC TCGGCATCAG CCGTAAGGTT TTGTGGGAAA AGATGCGCAA ATACCAGATC GCCGACGGCG AAACCGAGCT TCGCGAGCTG GAGTGA
|
Protein sequence | MKTDRWAYET LEIFVWEGRH DIADRVARFM APFGAEVIRA GGIDFQPAEP RLKPAVAVIS ASVVESGGFT VLDWQAAQGM PVIWVASDAQ HDSSRFPPEY THVLGPDFGA TELRAQISKV LPSMSSAQAQ AQDQSDLVAA SPAMHGLLEQ VDTFADCDSN VMLYGETGAG KERIARLLHD KNSVYGKGPF VAVNCGAIPD GLFESQFFGH AKGAFTGAMY AHRGYFEQAN GGTLFLDELG DLPLYQQVKL LRVLEDSECT RLGSTVPVKL DFRLVAATNK NLREMVATGK FRADLYFRLA VIELRIPSLE QRGADDKIAL LLSFLRHLLG DKTFDAMPPV PEWVRASVGR AYFAGNVREL RNLAERIGIT LRQFGRWDEA RILPLFAGLQ RDAFEREAGN GGNGGYGDRG GGGSGGNGGE EERRRILAAL DANNWRRQDT AATLGISRKV LWEKMRKYQI ADGETELREL E
|
| |