| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4253 |
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| Symbol | |
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| ID | 6285741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | + |
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| Start bp | 544057 |
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| End bp | 544980 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642618736 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_001892777 |
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| Protein GI | 187926432 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.78139 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.265077 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGCT TCCCAAACGC CGTGCGCGCC GCCCTGGCCG GCATGACCAT GCTGACCGTC
ATGCTGGCTG GCTGCGGCTC GATGGCCACG TCCGACATGA GCCTGCGTGC CGATGCCGAC
ATCGAGATGG CACGTCAGCG CCAGAGCCAG GAGAAGTCTG AGATCACCAG TCCGGCGACG
TATCTTTCGT TGATCCGCAG GATGCAGGAG CAGGGCCTGT ACTACGCATC GCTTGCGCAT
ATCGATGCCT ACCAGCAACG CTATGGCCGT GCACCCGAGA TCATGCTGCT GCGTGCGGAC
GCATTGCGCG AAACCGATCA GCTTGCCGCT GCCGATGCCG AATACCGTGC GGTGGTGGGA
GCAACGTCCG CCATGGGCGC AGGCACGCAA GGCGGATTGC TCAATGCCGC CGCATGGCGC
GGTCTGGGCA TCATTGCGGG GCGCCAGGGC AACTTTACCG AGGCGGCTCG TCGGCTGCAG
GTGGCAGCGC AGGCCAATCC TACCGACGCC AGCACAGCCA GCGATCTGGG CTACGCGCTG
ATGCGTGCCG GCGAGGTCGA ACAAGCCCGC GTGCCGCTGA TGCAGGCGCA GCAGATGGCC
GCTTCCAGCC CGAAGATCGC CGGCAACCTG GTGATCTGGT TGACCGTGAA TGACCGCAAG
GACGATGCTG CGTCGCTCGC GTCGCACGCC CAGCTGACGG CATCCGCGCG CAAGGCCATT
GACGAAGACG TGGCGCGCGT GCGGGGCGCT TGGCGCGATC GGCGTATCGG TCGCGACGCG
GCGGCGGCTG CCACCCGTGC GGTGGCGCTC AGCCCATCTG CCGCAGGCGT AGCCGGGACG
GCCACGCCCG CTATCACGAC CCAATCCCGT CCGCTGGCAT TGCAGCGCGG CCGCTTGCTT
GACACCTTGG AGACCGCGCA ATGA
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| Protein sequence | MTRFPNAVRA ALAGMTMLTV MLAGCGSMAT SDMSLRADAD IEMARQRQSQ EKSEITSPAT
YLSLIRRMQE QGLYYASLAH IDAYQQRYGR APEIMLLRAD ALRETDQLAA ADAEYRAVVG
ATSAMGAGTQ GGLLNAAAWR GLGIIAGRQG NFTEAARRLQ VAAQANPTDA STASDLGYAL
MRAGEVEQAR VPLMQAQQMA ASSPKIAGNL VIWLTVNDRK DDAASLASHA QLTASARKAI
DEDVARVRGA WRDRRIGRDA AAAATRAVAL SPSAAGVAGT ATPAITTQSR PLALQRGRLL
DTLETAQ
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