| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4252 |
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| Symbol | |
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| ID | 6285738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | + |
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| Start bp | 543066 |
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| End bp | 544055 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642618735 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001892776 |
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| Protein GI | 187926431 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.960786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.358405 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGATA CCCTGATCAC CCTCAGCCTG ACCGCAGCGG CCGCGGGCGT GCTGGTATTC
GGTGGGCTCG CGCTGCGTGC AACGCTCACG CGACATCGCA GCGCACGCAA GCTCGATACG
GCGCTGTCCG ACATGCGCGC GACGGCGGCC AATCCGGCCG CGCCCGCAGC GTCGCCGGTT
GTGCCGCCCG CCGCTAGACC GCGCCCGCAT GGCTCGCGTG AAGCCCAGCA GCTCCAGCAG
CAGATCGCCA AGGTGGGGCA GCGCTGGATC GACACAGGCC TGGGCCGCCG CATCGTGACT
GAGGAAGACC GCAAGCTGCT CGAAGAATGC GGTTACTACG GTGAACACGC CAGAACGGTC
TTTGGCGGCA CCCGTATCTT GCTGCCCCCG CTGCTTGCCG TATTCGGCGC ATTGCACGCG
TCATCGGCCC TGTTTGTGTT CGTGTTTGGC TTTGTCGGCT TTGCGCTGGG CTACCTTGCG
CCGAAGTGGC TGCTCGGGCG TCGGAAGGAA AGCCGCCGGC GCCGTATGGA TGATGAGCTG
CCGGTCATGG TCGACATGCT GCGGCTGCTG CAGGGCGTCG GCTTGTCGAT TGACCAGAGT
CTGCAGGTGA TTGCCAACGA ATTCCACGGC ATGCTGCCTG TGCTGGCGGG TGAATTTGGC
CGCGCCAACC AGCAGTTCGC CTCGGGCCGC TCCCGCGAGC AGACGCTGTT GCGCATCGCG
CGCCTGTTCG ACAACGAAGA CCTGAAGGGC CTGATCACGC TGCTTACCCA GGTGGATCGC
TTCGGCGGCG CAGTGCAGGA GCCGCTGCGG CAGTTCGGCG GGCGTCTGCA GGAGAACCGC
CGCGCGCGGC TGAAGGAGCG TGTGGGCAAG CTGACCGTGC AGATGACGAT GATCATGGTC
ATGACGCTAT TGCCCGCGCT GTTGATCATC ACCGCGGGGC CGGGGTTCAT GGGCGTCATG
CGCAGCCTGC AACAAACCGG GGGACATTGA
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| Protein sequence | MDDTLITLSL TAAAAGVLVF GGLALRATLT RHRSARKLDT ALSDMRATAA NPAAPAASPV
VPPAARPRPH GSREAQQLQQ QIAKVGQRWI DTGLGRRIVT EEDRKLLEEC GYYGEHARTV
FGGTRILLPP LLAVFGALHA SSALFVFVFG FVGFALGYLA PKWLLGRRKE SRRRRMDDEL
PVMVDMLRLL QGVGLSIDQS LQVIANEFHG MLPVLAGEFG RANQQFASGR SREQTLLRIA
RLFDNEDLKG LITLLTQVDR FGGAVQEPLR QFGGRLQENR RARLKERVGK LTVQMTMIMV
MTLLPALLII TAGPGFMGVM RSLQQTGGH
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