| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4249 |
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| Symbol | |
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| ID | 6285734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | + |
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| Start bp | 539442 |
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| End bp | 540785 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642618732 |
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| Product | putative pilus assembly protein |
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| Protein accession | YP_001892773 |
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| Protein GI | 187926428 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4963] Flp pilus assembly protein, ATPase CpaE |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.359357 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTATT TCCTTCTGCA CGGCGGCGCA CGTGGCGGTA AGCAAGGCGA CGCACAGTCG
GCAGGCGTAC ACCGCTGGCT GGCCGCGGCA ATTCGCGAGT TGGGCGTGCT GGTGGCCGAA
ACCACTGGCC ACGACGCGTT CATCGAGCAG ATTGGCGCAG TGAACCCCGA GGTGGTGTTC
GTGCGCTTTG CCTCGTCTCC CACACTGATC GACGTGCCAG ATCAGGACCA GAAGCTGGGC
GAGGGCGCCG ACGCGATCAA CGAGGCGATG CAACTGGTCG CGCAACTTGC GCGTCTGTTT
CCGGGCTTGC CGCTGGTGGC GGTGGGCTCC GCTGCCGATG GCCGCGCGAT GCTGGCTGCC
TTGCGCGCAG GGGTAAAGGA TTTCGTTGAC GTGGACGGCG CGCCGGCCGA GGCTGTGCGC
GTCGTGCGTC GACTGCTGGC GGACCGCGCA TCGGCTGAGC CGACCCGCCG TGGCCGCGTG
CTGGCCGTGT TGGGCGCGCG CCCCGGCGTG GGCGCCACCA CGTTGGCCAC CAATCTGGCC
ACGCTGGTGC GCCGCACGTC GGCCAGCGAT GTGATGCTGC TCGACCTTGG CCAGCCGCTG
CGTGATGGCG CCCTATACCT TAACGTGCAA GCCAACTTCC ACTTTGTCGA AGCCGTGCGC
AACCTGCGCC GCTTCGACCA GGTGTTTGTG CAGACCGCGC TGTCGCGTCA TCCGAACGGG
CTTGCGGTCC TGCCGTTGCC GATCTCGCTA GCCGAGATGC GCGACGTTTC GTTCTCCGAA
GCGCTGGGTC TGCTCAACCG CTTGCGCACG TTCTTCGACC TGCAGGTCGT TGACCTGGGT
GGCTTTGGCA ACATCGACTT CATCGCACAG ATCATCAAGG CCGCCGACGA TGTGATGCTG
GTGACCGAGC AAAGCGTGGG CGCCATCGTG TCGGCGGCTG AACTGATGCA GGAACTCAAG
AAGCGCGAGA TTGACCGTGA CCACCTGCAC CTGACCATTT CGAAGTTCGA CGCACGCCTG
TCGCTGGACG CAGCGCAGAT CGCCGAGCGG CTGGAGATTC CTTCGGTGCT GACGGTACCG
AATCGCCGTG AAGCCCTGGT CATTGCTTCC AACCAGGGCG CGATGCTCGC GGAAACGCAC
CCCACCGATG CCTATGTCCG CGCGCTTGCG CAGATTGCCC AGACACTCGG CTATGCCCAG
CAGAGCGAGC GCGCGTCTGG CTTGTCGAAC TGGGTGTCTG GCGTGAGTGC TCGACTGGGT
GGGCGCTTTG GCGGACGCTC CAAACGCAAG TCGGCAGACG CCAATGAACT GGATATCGGT
ACTACCGAAC GGAACGCGAC ATGA
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| Protein sequence | MDYFLLHGGA RGGKQGDAQS AGVHRWLAAA IRELGVLVAE TTGHDAFIEQ IGAVNPEVVF
VRFASSPTLI DVPDQDQKLG EGADAINEAM QLVAQLARLF PGLPLVAVGS AADGRAMLAA
LRAGVKDFVD VDGAPAEAVR VVRRLLADRA SAEPTRRGRV LAVLGARPGV GATTLATNLA
TLVRRTSASD VMLLDLGQPL RDGALYLNVQ ANFHFVEAVR NLRRFDQVFV QTALSRHPNG
LAVLPLPISL AEMRDVSFSE ALGLLNRLRT FFDLQVVDLG GFGNIDFIAQ IIKAADDVML
VTEQSVGAIV SAAELMQELK KREIDRDHLH LTISKFDARL SLDAAQIAER LEIPSVLTVP
NRREALVIAS NQGAMLAETH PTDAYVRALA QIAQTLGYAQ QSERASGLSN WVSGVSARLG
GRFGGRSKRK SADANELDIG TTERNAT
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