| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4245 |
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| Symbol | |
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| ID | 6285726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | + |
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| Start bp | 535980 |
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| End bp | 536531 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642618728 |
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| Product | peptidase A24A prepilin type IV |
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| Protein accession | YP_001892769 |
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| Protein GI | 187926424 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4960] Flp pilus assembly protein, protease CpaA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.501953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.336859 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCATAGCC ACATCGATAT TGCTGGCTGG GTAAGCGTCG CAGTTCTCGC AGTTCTTGCA
ATCGCATTGG ACATCCGCTT ACGGCGCGTG CCGAACTGGC TCGTCGCCGC GGGGGTAGTG
CTGTCCATCG CTCTGATCAA GTTCGGCGGG GTACAAGACC TTGCCTATGA CTGGCAGGAC
TTCTGGCTCG GCGGAGCGAT TGCATTTGCC TGCTTTCTGC CGCTGTACAC CCTCGGCTGG
ATGGGCGCCG GCGACGTGAA GTTCTTCACT GTCGTCGGCC TCCTGGCAGG CTGGCATGGC
CTTGTGGCCG TATGGCTTGT CTCGAGCATG ATTTCCGGCT TGCACGCGCT CGGCATCGTA
GTGTTACGCC AGCTTGACGC GTCGTCTCCA TCGGCCTGGA TTGTGATGCG CGTGTGCCCG
GCTATCGCTC GCTGGGATAT CGCTCATGCA GGGCTTCGAG GCATCCCCTA CGCCGCCTAC
ATGGCGATCG GGTTGCTGAG TCTGCCATGG GTTCCCTCAG TGATGCGCAT GCCTTGGCTG
CCGGGCATGT AG
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| Protein sequence | MHSHIDIAGW VSVAVLAVLA IALDIRLRRV PNWLVAAGVV LSIALIKFGG VQDLAYDWQD
FWLGGAIAFA CFLPLYTLGW MGAGDVKFFT VVGLLAGWHG LVAVWLVSSM ISGLHALGIV
VLRQLDASSP SAWIVMRVCP AIARWDIAHA GLRGIPYAAY MAIGLLSLPW VPSVMRMPWL
PGM
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