Gene Rpic_4244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4244 
Symbol 
ID6285716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp535791 
End bp535970 
Gene Length180 bp 
Protein Length59 aa 
Translation table11 
GC content56% 
IMG OID642618727 
ProductFlp/Fap pilin component 
Protein accessionYP_001892768 
Protein GI187926423 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3847] Flp pilus assembly protein, pilin Flp 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.272454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.405174 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACG CCATTCTGAA GTTCATCCGT GACGAACAAG GTGCCACTGC CGTCGAGTAC 
GGCATGATCG CTGGTCTGAT CGCAGCGGCC ATCACGGTCA TCGTGGGCAA GCTGGGTACG
CAGCTCAACA CCGTCTTCAC CAATATCTGT ACAGCCGTCA AGGGCGGGAC TGCTTGCTAG
 
Protein sequence
MKNAILKFIR DEQGATAVEY GMIAGLIAAA ITVIVGKLGT QLNTVFTNIC TAVKGGTAC