Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4234 |
Symbol | |
ID | 6285693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 520204 |
End bp | 521184 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642618717 |
Product | integrase family protein |
Protein accession | YP_001892758 |
Protein GI | 187926413 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACCTCAT TCACGCCGCC CGCCACGCCC GTTCCGGACC TGTTTGAGCC CAGCCTGCAA GACTGGGCCG AGCGGCCCGC GCAAGCCTTC GAACATTGGC TGGCCGCGCG AGGCTATCGC GAATCGTCGG CGACGGTGTA TCGCGCGATG TGGCGCAAAT GGCTGCGCTG GGCCGAGTCG CATCAACGCG CCTTGGCCAA CTGGAGCGCG GGCGACATCG CCGCCTTTCT TGATGAATCG GGTCTGACCA AGCTGCATCG CTACCGCTAC GCGCGCCTGA TCGAACGCGT CTTCCATCAG ATCGAGCAAC AACGCACGGG CACGCACAAC CCTGCAAGCT CGGCGGTGCA GCAGAAGTTG GCGGAAGGCG AAAACGATCC GACCACGTTT CTCTCCTTTG CCGAGCGCGC GGCGATCGAG GCTTCCCTCG AGGTGGACGC GCAGGCCAGC GAGGCCGCCG CCAATGCCAG CGCGTTCAAG CTGGCGCGCG ACCGCGCACT CGTTGCGGTT TGCCATGGCG CGGGGTTGAA GGTCGCGCAG GTGCAATCGT TGCTGCTCCG CCAGGTGGAT GCGGCGCTTG AGGCGATCGT CGTCGAGCGC CCGCGCGGCC CGTCGTACAA GGCGCCCATG CTTGAAGCTG CACGCCCCGC GATGGCGGCC TGGCTGGCGG TGCGCGCACA CGCAGAGGTG CCGGGCGAGC GCGTGTTCGT TGCCGATGCC GGCGGGCGTG TCATGCACGC AGCGTCGGTG TACCGGCGCG TGGAGGCCTG GCTGGCTGCG CTGCCGGCGT TGTTGCACCG CAGCGAGCGG CTGTCGCCGC AGACGCTGCG CAATGGCTAC ACCGCCGCGC TGTTCGACGC AGGCGCAAAC CCTGCCGAGG TGGGGTACGC ACTGGGCCTG CGCGATGCGA CTTCGGCATG GCGTCTGCGC GCAGCCTATG CTGAGTGGCA GGCGGCCGCC CATCCAGATG GCCAGCCGTA G
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Protein sequence | MTSFTPPATP VPDLFEPSLQ DWAERPAQAF EHWLAARGYR ESSATVYRAM WRKWLRWAES HQRALANWSA GDIAAFLDES GLTKLHRYRY ARLIERVFHQ IEQQRTGTHN PASSAVQQKL AEGENDPTTF LSFAERAAIE ASLEVDAQAS EAAANASAFK LARDRALVAV CHGAGLKVAQ VQSLLLRQVD AALEAIVVER PRGPSYKAPM LEAARPAMAA WLAVRAHAEV PGERVFVADA GGRVMHAASV YRRVEAWLAA LPALLHRSER LSPQTLRNGY TAALFDAGAN PAEVGYALGL RDATSAWRLR AAYAEWQAAA HPDGQP
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