Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4232 |
Symbol | |
ID | 6285688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 517752 |
End bp | 519803 |
Gene Length | 2052 bp |
Protein Length | 683 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642618715 |
Product | NADH:flavin oxidoreductase/NADH oxidase |
Protein accession | YP_001892756 |
Protein GI | 187926411 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0492] Thioredoxin reductase [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGCCT CCACGCCCTC CTCGCCGTAC CCCCACCTAC TGAGCCCGCT CGACCTTGGC TTCACCACGC TCAAGAACCG CGTGCTGATG GGGTCGATGC ATACCGGGCT GGAAGATGGC AACCACTTCG ACCGGCTCGC CGCCTACTTT GCCGAGCGCG CACGCGGCGA TGTCGGGCTG ATGGTCACGG GCGGATTCGC GCCCAATATT GCCGGTTGGA CCAAGCCCTT TGCCGGGCGC CTGGCCACGC ATGGTGCGGC CCGCCGCCAC CGCGCGGTCA CCAACGCCGT GCATGAAGAA GGCGGCAAGA TCGCCCTGCA GATCCTGCAC ACCGGCCGCT ATGGCTATCA CCCGTTTGCG GTCGCGCCCA CGGCGCTGCG CTCACCCATC AGCCCGTTCA CGCCGCGCGA GTTGTCGGTG CGCGGTATCG AGCGGCAGAT TCGCGCCTTC GTGCATTGCG CCCAGTTGGC CCGCGAAGCC GGCTACGACG GCGTCGAGAT CATGGGTTCC GAGGGCTACT TCATCAACCA GTTCCTCGTC ACCCACACCA ACAAGCGCAC GGACGACTGG GGCGGCAGCT ATGCCAACCG CATGCGCCTG CCCGTGGAAA TCGTCCAGCG CACGCGCGAG GCGGTCGGCA AGGATTTCAT CATCATCTAT CGCCTGTCGA TGATCGACCT GATTCCCGAC GGCAGCTCGT GGGAAGAAGT CGTGCAGCTT GGCAAGGCCG TGGAGCGCGC GGGTGCCACC ATCATCAACA CGGGCATCGG CTGGCACGAG GCGCGCATCC CGACCATTGC GACGAGCGTG CCGCGTGCGG CGTTTGCGTG GGTCACGAAG AAGATGAAGG GCGAGGTCGG CATTCCGCTG GTGACGTCCA ACCGCATCAA CACGCCCGAG GTGGCGGAGG CCGTGCTGGC CGACGGGTGC GCCGACATGG TTTCGATGGC CCGGCCGCTG CTGGCCGATG CCGACTTCGT ACGCAAGGCC GCCACGAACC GCGCGCAGGA CATCAACACC TGCATCGCCT GCAACCAGGC CTGCCTGGAC CACGCGTTCA AGGCCAAGAT TGCGAGCTGC CTCGTCAACC CGCGCGCGTG CCATGAGACG GAACTCGTCA TTCGACCGAC GCCCGCCAAG CGTCGCTTTG CAGTGGTGGG CGCCGGGCCT GCGGGGCTAT CCGCGGCGAT CACACTGGCC GAGCGTGGGC ACGCCGTGGA CCTGTTCGAC GCGGCACCGG AACTCGGCGG CCAGTTGAAC ATGGCCAAGA CGATCCCGGG TAAAGAAGAG TTTCATGAGA TGCTGCGTTA CTTCACCCGT CGCGTCGCCA CGACGGGCGT GACGCTGCGC CTCGGTACAC GCGTGGATGC GCAGCAGCTT CTTGCGGCCA AGTACGACGA GATCATCATC GCGACGGGCG TGTCGCCGCG CAATCCGAAG ATCCCGGGGC AGGATCATCC GAGCGTGCTG TCGTACATCG ATGTGCTGCG CCATCGCAAA CCGGTGGGCA AGCGCGTGGC GATTGTCGGA GCGGGTGGCA TCGGCTTTGA CGTGGCGGAA TTCCTCGCGC TGGACGGCCA CTCGCCCACG CTCGATCTGC AAACGTGGCG CGCCGAATGG GGCGTGGGAG ATCCGACCGA AGTGCGTGGC GGTGTGGATG GCATCCGCCC TGAACCCCAA ACACCCGCGC GCGACATCGT CCTGCTGCAG CGGCGTGCCG GCAAACTCGG CGGCGGTCTC GGCAAGACCA CGGGCTGGAT TCATCGGACC AGCCTGAAGA ACCTGGGCGT GCGCATGGTG GGCGGCGTGA ACTACGAGCG CATCGGCGAC GAAGGCCTGC TCGTGAGCTA CGGCGAAAAA CGCGAGGCCG CCGAATGGCT GCCGGTCGAT TCCGTCGTGC TGTGCGCCGG GCAAGAGCCA TTGCGCGAAC TCGTTGCGCC GCTGCAGGCG GGCGGAGCAA AGGTGCACGT CATCGGTGGT GCAGACGAGG CGCTCGAACT GGACGCCAAA CGCGCGATCG ACCAGGGAAC GCGTCTGGCT GCATCGCTGT GA
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Protein sequence | MPASTPSSPY PHLLSPLDLG FTTLKNRVLM GSMHTGLEDG NHFDRLAAYF AERARGDVGL MVTGGFAPNI AGWTKPFAGR LATHGAARRH RAVTNAVHEE GGKIALQILH TGRYGYHPFA VAPTALRSPI SPFTPRELSV RGIERQIRAF VHCAQLAREA GYDGVEIMGS EGYFINQFLV THTNKRTDDW GGSYANRMRL PVEIVQRTRE AVGKDFIIIY RLSMIDLIPD GSSWEEVVQL GKAVERAGAT IINTGIGWHE ARIPTIATSV PRAAFAWVTK KMKGEVGIPL VTSNRINTPE VAEAVLADGC ADMVSMARPL LADADFVRKA ATNRAQDINT CIACNQACLD HAFKAKIASC LVNPRACHET ELVIRPTPAK RRFAVVGAGP AGLSAAITLA ERGHAVDLFD AAPELGGQLN MAKTIPGKEE FHEMLRYFTR RVATTGVTLR LGTRVDAQQL LAAKYDEIII ATGVSPRNPK IPGQDHPSVL SYIDVLRHRK PVGKRVAIVG AGGIGFDVAE FLALDGHSPT LDLQTWRAEW GVGDPTEVRG GVDGIRPEPQ TPARDIVLLQ RRAGKLGGGL GKTTGWIHRT SLKNLGVRMV GGVNYERIGD EGLLVSYGEK REAAEWLPVD SVVLCAGQEP LRELVAPLQA GGAKVHVIGG ADEALELDAK RAIDQGTRLA ASL
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